| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0690 |
|---|
| Symbol | abfT-1 |
|---|
| ID | 2552694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 745974 |
|---|
| End bp | 747269 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637149441 |
|---|
| Product | 4-hydroxybutyrate CoA-transferase |
|---|
| Protein accession | NP_904965 |
|---|
| Protein GI | 34540486 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000582871 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACG TATTAGCGGA ATATGCCTCC CGAATTGTTT CGGCCGAAGA AGCCGTAAAA
CATATCAAAA ATGGAGAACG GGTAGCTTTG TCACATGCTG CCGGAGTTCC TCAGAGTTGT
GTTGATGCAC TGGTACAACA GGCCGACCTT TTCCAGAATG TCGAAATTTA TCACATGCTT
TGTCTCGGCG AAGGAAAATA TATGGCACCT GAAATGGCCC CTCACTTCCG ACACATAACC
AATTTTGTAG GTGGTAATTC TCGTAAAGCA GTTGAGGAAA ATAGAGCCGA CTTCATTCCG
GTATTCTTTT ATGAAGTGCC ATCAATGATT CGCAAAGACA TCCTTCACAT AGATGTCGCC
ATCGTTCAGC TTTCAATGCC TGATGAGAAT GGTTACTGTA GTTTTGGAGT ATCTTGCGAT
TATAGCAAAC CGGCAGCAGA AAGCGCTCAT TTAGTTATAG GGGAAATCAA CCGTCAAATG
CCATATGTAC ATGGCGACAA CTTGATTCAC ATATCGAAGT TGGATTACAT CGTGATGGCA
GACTACCCTA TCTATTCTCT TGCAAAGCCC AAAATCGGAG AAGTAGAAGA AGCTATCGGG
CGTAATTGTG CCGAGCTTAT TGAAGATGGT GCCACACTCC AACTCGGTAT CGGCGCGATT
CCTGATGCAG CCCTGTTATT CCTCAAGGAC AAAAAAGATC TGGGGATCCA TACCGAGATG
TTCTCCGATG GTGTTGTCGA ATTAGTTCGC AGTGGAGTAA TTACAGGAAA GAAAAAGACA
CTTCACCCCG GAAAGATGGT CGCAACCTTC TTAATGGGAA GCGAAGACGT ATATCATTTC
ATCGACAAAA ATCCCGATGT AGAACTTTAT CCGGTAGATT ACGTCAATGA TCCGCGAGTA
ATCGCTCAAA ATGATAATAT GGTCAGCATC AATAGCTGTA TCGAAATCGA TCTTATGGGA
CAAGTCGTGT CCGAATGTAT AGGAAGCAAG CAATTCAGCG GAACCGGCGG TCAAGTAGAT
TATGTTCGTG GAGCAGCATG GTCTAAAAAC GGCAAAAGCA TCATGGCAAT TCCCTCAACA
GCCAAAAACG GTACTGCATC TCGAATTGTA CCTATAATTG CAGAGGGAGC TGCTGTAACA
ACCCTCCGCA ACGAAGTCGA TTACGTTGTA ACCGAATACG GTATAGCACA ACTCAAAGGA
AAGAGTTTGC GCCAGCGAGC AGAAGCTCTT ATTGCCATAG CCCACCCGGA TTTCAGAGAG
GAACTAACGA AACATCTCCG CAAACGTTTC GGATAA
|
|---|
| Protein sequence | MKDVLAEYAS RIVSAEEAVK HIKNGERVAL SHAAGVPQSC VDALVQQADL FQNVEIYHML
CLGEGKYMAP EMAPHFRHIT NFVGGNSRKA VEENRADFIP VFFYEVPSMI RKDILHIDVA
IVQLSMPDEN GYCSFGVSCD YSKPAAESAH LVIGEINRQM PYVHGDNLIH ISKLDYIVMA
DYPIYSLAKP KIGEVEEAIG RNCAELIEDG ATLQLGIGAI PDAALLFLKD KKDLGIHTEM
FSDGVVELVR SGVITGKKKT LHPGKMVATF LMGSEDVYHF IDKNPDVELY PVDYVNDPRV
IAQNDNMVSI NSCIEIDLMG QVVSECIGSK QFSGTGGQVD YVRGAAWSKN GKSIMAIPST
AKNGTASRIV PIIAEGAAVT TLRNEVDYVV TEYGIAQLKG KSLRQRAEAL IAIAHPDFRE
ELTKHLRKRF G
|
|---|
| |