Gene PG0392 details

Gene Information

• Locus tag: PG0392
• Symbol: rplJ
• ID: 2551584
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 424134
• End bp: 424658
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637149168
• Product: 50S ribosomal protein L10
• Protein accession: NP_904698
• Protein GI: 34540219
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGAAAGG AAGATAAAGG TACAGTTATA AGGCAGTTGG CCAAATATAT CGGCCAATAC 
CCCCACTTCT ACTTGACTGA CATAGAAGCA TTAAATGCTG AGAAAACATC AGAGCTCCGT 
CGCAACTGCA ATAAAAACGG AGTGAAGTTG GTTATGGTGA AAAACACGCT TTTGCGTGCA 
GCCTTAGCAG CGAGTGATGT AGATTTCTCG TCATTGTATA GCTGTCTGAA AGGGAATACC 
GCTGTCATGT TCTGTGAAGT GGCTAATTCT CCGGCCAAAG TAATCAAGCA GTTTACAAAG 
GATACCAAAG GAGAAGGAAA GCCTTGGCTA AAAGCTGCAT ACGTGCAGGA AAGCTTCTAC 
ATTGGGAGGG AAAATCTCGA TGCTTTGGTT TCGATCAAGA GCAAAAACGA ACTCATCGCA 
GATGTTGTGG CATTGCTGCA GTCTCCGGCC AAGAACGTTA TTGCATCTTT GCAGTCAGCA 
GGTCAAACGA TCCATGGTGT GTTGAAGACC TTGGAAGAAA AATAA 

 

Protein sequence

MRKEDKGTVI RQLAKYIGQY PHFYLTDIEA LNAEKTSELR RNCNKNGVKL VMVKNTLLRA 
ALAASDVDFS SLYSCLKGNT AVMFCEVANS PAKVIKQFTK DTKGEGKPWL KAAYVQESFY 
IGRENLDALV SIKSKNELIA DVVALLQSPA KNVIASLQSA GQTIHGVLKT LEEK