Gene PG0316 details

Gene Information

• Locus tag: PG0316
• Symbol: serS
• ID: 2551709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 348577
• End bp: 349848
• Gene Length: 1272 bp
• Protein Length: 423 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637149099
• Product: seryl-tRNA synthetase
• Protein accession: NP_904632
• Protein GI: 34540153
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0172] Seryl-tRNA synthetase
• TIGRFAM ID: [TIGR00414] seryl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.317147
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGACAC TCAAGCAAAT CATAGAAAAC AAGGAAGAAG TGATCCGTCG CTTGGCGGTG 
AAGCACTTCG ATGCAGCTGC TATTCTCGAC GAAGTCATCT CTCTCGACAG ACAGCGACGC 
GAAACTCAAC AGAGTCTGGA TGCTCGCTTG GCGGAGCAAA ACGCCATTGC CAAGGAGATC 
GGAGCTTTGA TGAAAGCCGG CAAGAAAGAC GAGGCAGAGG CCATCCGTGC GAAAGTAGCC 
GATATGAAAG CCGGGAGCCA CCATCTGGAA GAGCGGAAAG CTGATCTGGA GAATGCTATA 
CGCCAACAGC TTCTGCTTAT CCCGAATCTG CCGCATGAGT CTGTCCCTGC AGGCAAGACC 
GCAGAGGAGA ATGTCTGTGT GAAGACAGGC GGCACAGTGC CGGAGCTTGG AACGCACAAG 
CTCCCACATT GGGATCTGGC CAAGAAATAC GATCTGATCG ACTTCGAACT CGGCGTCAAG 
ATAACCGGAG CAGGCTTCCC TGTCTATAAG GGCAAAGGAG CACGCCTGCA GCGAGCTTTG 
GTCAACTTCT TCTTGGATGA AGCCCGCAAC GCCGGCTTCA CGGAGATAGA GCCGCCCTAT 
GTAGTCAATG AGGATTCCGG CTACGGTACG GGACAGCTCC CTGACAAGGA AGGGCAGATG 
TACCATGTCA CGGCGGACAA CCTGTATCTG ATCCCCACGG CAGAGGTGCC GGTGACCAAT 
ATCTTCCGCG ATGTCATTCT CTCCGAGGAC GAATTGCCCA TTCTCCTGAC CGCTTACTCG 
GCTTGCTTCC GACGCGAAGC CGGTTCGTAC GGCAAGGATG TTCGCGGTCT GAACCGCCTC 
CATCAGTTCA ACAAGGTGGA GATCGTCTGC ATCGACAAGC CCGAACACTC CTACGAACAG 
CTCGATCAGA TGGTCGGCTA TGTCCAAGGC CTTGTAGATA AGTTGGGACT TCCGTGGCGT 
ATCCTTCGCC TCTGCGGCGG AGATATCAGC TTCACTTCGG CATTGACTTA CGATTTCGAA 
GTCTATTCGG CTGCCCAAGA GCGGTGGTTG GAGGTTAGCT CGGTGTCCAA TTTCGAGAGC 
TTCCAAGCCA ATCGTCTGAA GTGCCGTTAT CGCAATGCGG ATAAGAAAGT GGAGCTTTGC 
CACACGCTCA ACGGTAGTGC CTTGGCCTTG CCGCGTATCG TGGCTGCTCT GCTGGAAAAC 
AATCAGACAG CCGATGGCAT CCGCATCCCC GACTGTCTGG TGCCTTATAC AGGCTTCTCG 
ATGATCGATT GA 

 

Protein sequence

MLTLKQIIEN KEEVIRRLAV KHFDAAAILD EVISLDRQRR ETQQSLDARL AEQNAIAKEI 
GALMKAGKKD EAEAIRAKVA DMKAGSHHLE ERKADLENAI RQQLLLIPNL PHESVPAGKT 
AEENVCVKTG GTVPELGTHK LPHWDLAKKY DLIDFELGVK ITGAGFPVYK GKGARLQRAL 
VNFFLDEARN AGFTEIEPPY VVNEDSGYGT GQLPDKEGQM YHVTADNLYL IPTAEVPVTN 
IFRDVILSED ELPILLTAYS ACFRREAGSY GKDVRGLNRL HQFNKVEIVC IDKPEHSYEQ 
LDQMVGYVQG LVDKLGLPWR ILRLCGGDIS FTSALTYDFE VYSAAQERWL EVSSVSNFES 
FQANRLKCRY RNADKKVELC HTLNGSALAL PRIVAALLEN NQTADGIRIP DCLVPYTGFS 
MID