| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0137 |
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| Symbol | pepD-1 |
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| ID | 2552227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 159244 |
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| End bp | 160698 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637148946 |
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| Product | aminoacyl-histidine dipeptidase |
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| Protein accession | NP_904479 |
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| Protein GI | 34540000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.49846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACAG AGATCAAAAC CCTCAAACCA CAAGCTGTCT GGGAGTACTT CTACGACCTG
ACACAAATAC CCCGACCTAC CGGACAGATG GACGAGGTGA CCAAGTACGT ATTCGACTTC
GGTAAGAGGC TTGGTTTGGA GACCGAGCAG GACGAGGTGG GCAATGTCAT CATTCGCAAG
CCGGCCACAC CGGGCATGGA AAACAAACCG ATCGTGACCC TCCAATCGCA CTTGGATATG
GTGCCTCAAA AGAATTCGGA CATCGATCAT GATTTCACCA AAGACCCCAT CGATGCATAT
ATCGACGGAG AGTGGGTGAA AGCTCGAGGC ACTACTCTGG GAGCCGATAA CGGTATCGGA
GTGGCTTATG CCATGGCGGC TATGGCAGAC CCAATGCTCA AACATGGTCC GCTGGAAGCT
CTTTTCACTA TTAATGAAGA AGTGGGAATG GACGGTGCCA ATGGTCTCAA GCCCGGGTTC
TCTCGTGGTG ACATCCTGCT CAATATAGAT TCGGAGGAAG AAGGCAAGCT CTTCGTAGGC
TGTGCGGGAG GTATTGATGT CAATGTCACG CTCGAATATA AGGAGGAAGA GCTGGTTTCG
GACGAAGAAA TAGGCGTAAA GATATCTTTG ACAGGACTCA AAGGCGGACA TTCGGGTGTC
GATATTCACC TCGGACGTGC CAATGCCAAT AAACTGATGT TCAGATTCTT GAAAGAGGCT
GTAGGATTCT ATGGTGCTCG CTTGGCATGG GTAGAGGGAG GATCGCTCCG CAATGCTATT
CCGCGCGAAG CGTTTGCCGT TATCACCATT CAGGAAGAAG AGGCCGAAGC TGTCTGGGAA
CTGGTATCCG ACTACCAGGA TTTGTTCCGT AAGGAATTCA GCGGCATAGA GGAAAACATC
AAGTTCGAGG CAAGTCGTAT CGAATGTCCC CGAATGATTA TTCCCGAAGA GATCCAAGAC
TGTCTGATCA ATGCCGTGGA AGCCTGCGTC AATGGCCCGC AGTCCATGCT CCAAGATTTC
CCCGGTACGG TAGAGTCATC ATCCAATCTG GCGTTGATCA CGGCTAAGGA AGGGTCAATC
TCCGTACGTT TCCTGGTGCG TAGCTCTTCC GAATCGCACA AGATGTGGGT AGCATCGGCC
ATCGAGAGCG TTTTCTCATT GGCAGGAGCA CGAGTGGAAT TCGACGCCTC GTACAACGGC
TGGCAACCTA ATATCCAGTC GCACATTCTC GAAGTGATGA GCAAAGTCTT CGAAGAGTAT
TACGGCCAAA AGCCCGAAGT ACAGGTGATG CATGCCGGTC TGGAATGCGG TATCATCCAA
GGCGTAATGC CGGATATGGA CATGATCTCG GTAGGTCCCG AACTCCAATC GCCACACTCT
CCGGACGAAA GGATTCATAT CGAATCCGTA GCTCGCACAT GGGAAGTACT GGTAAAAGTA
CTGGAGCGAG TGTAA
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| Protein sequence | MSTEIKTLKP QAVWEYFYDL TQIPRPTGQM DEVTKYVFDF GKRLGLETEQ DEVGNVIIRK
PATPGMENKP IVTLQSHLDM VPQKNSDIDH DFTKDPIDAY IDGEWVKARG TTLGADNGIG
VAYAMAAMAD PMLKHGPLEA LFTINEEVGM DGANGLKPGF SRGDILLNID SEEEGKLFVG
CAGGIDVNVT LEYKEEELVS DEEIGVKISL TGLKGGHSGV DIHLGRANAN KLMFRFLKEA
VGFYGARLAW VEGGSLRNAI PREAFAVITI QEEEAEAVWE LVSDYQDLFR KEFSGIEENI
KFEASRIECP RMIIPEEIQD CLINAVEACV NGPQSMLQDF PGTVESSSNL ALITAKEGSI
SVRFLVRSSS ESHKMWVASA IESVFSLAGA RVEFDASYNG WQPNIQSHIL EVMSKVFEEY
YGQKPEVQVM HAGLECGIIQ GVMPDMDMIS VGPELQSPHS PDERIHIESV ARTWEVLVKV
LERV
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