| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0035 |
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| Symbol | dnaE |
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| ID | 2551752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 42688 |
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| End bp | 46374 |
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| Gene Length | 3687 bp |
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| Protein Length | 1228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637148852 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | NP_904390 |
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| Protein GI | 34539911 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCT TCGTACACCT GCACGTACAC TCCCAATTCT CTCTGCTTGA CGGACAGGCC
GCTATCAATG ACTTGGTGGA CAAAGCCATT GCCGACGGTA TGCCGGGTAT TGCTCTGACC
GATCATGGAG CCATGTTCGG CATCAAGGAG TTTTACAACT ATGTGGAGAA GAAGAACAGC
GGGCACAATG CGACATTGAA GGACTGTAGG CGCGAACTGG ATCAACTGAA CGACTCGAAG
AGTGCCGACA TGCTGACCGA TGAAGAGCGC AACCGCATTG TCAAGTTGCA GCAGAAGATA
GAGGAGACCA AAAAACTCCT CTTCAAACCT ATCCTTGGGT GTGAGGCATA TTGTGCTCGA
CGTACGCGAT TCGACAAGGA TAACCAGATA CCGGATCCGT ATCATCCCAG ACGCTCCATC
GATGCCAGCG GTTGGCACTT GATCCTGCTG GCAAAAAACT TGCGAGGGTA CAAGAATCTG
ATCAAAATGG TCAGCTATTC ATGGACAGAA GGACAGTACT ACCGTCCGCG TATCGACAAG
GAGCTTTTGC AGAAGTATCA TGAAGGTATC ATTGTCTCTT CGGCCTGCCT GGGAGGAGAG
ATACCACAGC ATATCATGGC AGGAGAGATT GCCAAGGCTG AGGAGGCCAT CCTCTGGTTC
AAAGAGCTTT TTGGGGACGA TTACTATTTG GAGATTCAGC GACACGAGAC GCATAATCCA
CTCGGCAATC AGGATGTTTT CCCCCAGCAA CAGCGCGTAA ATCGCGTCAT ACTGGAGCTT
GGCAAGAAGT TGGGCGTCAA AGTTATTGCG ACGAACGATG TCCATTTCTG CAATGAAGAA
GATGCTGAGG CGCACGACCG TCTGATCTGT CTGAGCACAG GGAAGGATCT GGACGATCCG
AACAGGATGC GCTATACCAA GCAGGAATGG ATGAAGACTA CGGCAGAGAT GAGCGCCATA
TTCGAGGATC TACCTGAGAC TCTTTCCAAC ACATTAGAAA TACTTGACAA GGTAGAGTTA
TACAGCATCG ACAACAAAGC CCTGATGCCG GACTTTCCTA TCCCCCCCGA ATATAAAGAC
GATGATGACT ACCTGCGTTT CCTTACCTAC GAAGGGGCCA GGCGCAAGTA TGGAGAGGAT
CTTTCCGATG AGATAAAAGA GCGTATCGAC TTTGAACTGG AAACCATCAA AGGAATGGGG
TTCCCCGGCT ACTTCCTTAT TGTACAGGAT TTCATTGCAG CCGCACGAAG TATGGGCGTC
TCTGTCGGAC CCGGCCGAGG ATCGGCAGCC GGTTCGGCGG TAGCTTACTG TTTGGGGATC
ACGGATATCG ATCCGATCAA GTACCATTTG CTTTTCGAGC GTTTTCTCAA TCCGGATCGT
ATCTCCATGC CCGATATAGA CGTCGACTTC GATGATGACG GGCGTGCCGA AATACTCCGC
TGGGTGACGG AAAAATACGG CAAGGAGAGA GTGGCCCACA TCATCACCTA CGGTACGATG
GCCACAAAGA GTTCTATTAA GGATGTGGCT CGCGTACAGA GGCTGCCCTT ACTCGAAAGC
AATCGTTTAG CCAAGCTCGT ACCAGACAAA ATTCCCGGAG AGAAGAAAGT CAATCTGAAG
AAAGCAATCG AATTTGTTCC AGAGCTGAAG CAAGCATCGC TAAGCTCCGA TAAGGTAATG
CGCGATACCC TGAAATACGC CCAAATGCTG GAGGGGAATG TGCGCAATAC AGGTGTGCAT
GCCTGCGGTA TCATCATTGG GAAAACGGAT ATCAGCGATG TCGTTCCGGT CAGTACGGCT
CCCGACAAAG ACACGAAGGA GGAGCTGCTG GTCACACAAT ACGAAGGCTC TGTCATCGAA
CAGACGGGAC TGATCAAAAT GGACTTCCTC GGGCTGAAAA CGCTCTCGAT CATCAAAGAA
GCTTTGGTCA ACATAAAGCG GCGCCATGGC ATTGACTTGA ATATAGACAC GATCCCTCTC
GACGATCCTC TTACATATAA GCTATACAGC GATGGACGTA CCATAGGTAC TTTCCAATTC
GAATCCGGTG GGATGCAAAA GTATCTTAGG GAGCTACAGC CCTCTGCTTT CGAGGACTTG
ATAGCGATGA ATGCTCTCTA TCGTCCCGGT CCGATGGACT ATATCCCTTC TTTTATCGCA
CGCAAGCATG GGCGTGAGCC TATCGATTAC GACCTGCCTG AGATGGAAGA ATATCTCAAA
GAAACTTATG GTGTGACGGT GTATCAGGAG CAAGTCATGC TTCTGAGTCG CAAGCTTGCC
GGTTTTACCC GAGGCCAGAG CGATGAGCTT CGTAAGGCTA TGGGCAAAAA ACTCATCGAA
AAGATGAATG TTCTGAAGGT GAAGTTTCTC GAGGGGGGGA ATAAGAATGG ACATCCGGAA
GAAGTTCTGG AAAAGATCTG GACAGACTGG GAGAAGTTCG CCAGCTATGC TTTCAACAAG
AGTCATGCCA CCTGCTACAG TTGGGTAGCC TACCAAACGG CTTACCTGAA AGCAAACTAT
CCTGCTGAAT ATATGGCAGG AGCATTGAGC CGAAACCTGA ATAACATCAC GGAAATAACC
AAGCTCATGG ATGAGTGCAA GTCCATGAAG ATCGGCGTAT TGGTACCGGA TGTGAACGAG
TCCGAAATGA AATTCTCAGT AAATGCCAAT GGGGATATTC GGTTCGGTCT CAGCGCTGTA
AAGGGTGTAG GATCGGGAGC CGTGGAGCAG ATCATTGCCG AACGCGAAGC CAACGGGCTA
TATAAGGACA TCTTCGACTT TGTGGAGCGG ATCAATCTCT CTGCCTGCAA TCGCAAGACG
ATGGAGAGTC TGGCCTTGGC CGGTGCTTTC GACAGCTTCG CTCTATCCCG GGAGGAATAT
ATGGCTCCTC CTCTGACAGG AAGAGAGGAG TCATACATAC AAGCACTTAT GCGCTATGGG
TCCGTAGTAC AAGAGGAGAA GCACAGCCAG AGCAATTCCC TCTTCGGAGA GGAAGAAGAT
CTGATGATTC CTCGTCCGCA GCCATCTCCC ACCGAGCCAT GGAACGACTT GGAAAGGCTC
AATAAAGAAC GTGAACTCGT AGGGCTCTAC CTTAGTTCCA ATCCAATGGC TCAGTACCAA
GTCATTCTCG ATCACTATTG CAATACCCAT GCAGCCGATT TGACCGATCC GGATTCCTTG
GTCGGGAAAA ATTTGGTTTT GGCCGGTATT GTTACCAAGG CTTTTCAGGG AATCTCTCGC
TCGAATAATC CGTACTCAAA GATTACGTTA GAGGATCTGT CCGGCACGGG CGAAATACCT
CTTTTCGGAC AGGCTCATGT AAACTTCGGC AATTATTGCA AGGAGGGGCT GTATCTCCTC
ATTCGCGCAT CCGTTCAGCC TCATAAGTGG AAAGAGGGTG AAATGGAATT GGTCGTGACC
TCAATCGAAC TGCTACCTCA AGTGGCCGAT ACATTGATCA AAAAGATGAC GATCCTACTG
CCGGCATCGA AGATCGACAA TGAGCTGATC GAAATGCTGT CTGACGAATT GACAAACAAT
TCGGGGAAAA CGATGTTATT TATCAAAGTG TATGACCATA CGGAGACTTT CGATGTCGAA
CTGGCACAGC AGAAATCGCT GATCAAAGTG TCCCCCGAAC TGGTGAATAG ATTGAAGACT
TATGAGATTA ACTTTGCACT TGAATAG
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| Protein sequence | MEPFVHLHVH SQFSLLDGQA AINDLVDKAI ADGMPGIALT DHGAMFGIKE FYNYVEKKNS
GHNATLKDCR RELDQLNDSK SADMLTDEER NRIVKLQQKI EETKKLLFKP ILGCEAYCAR
RTRFDKDNQI PDPYHPRRSI DASGWHLILL AKNLRGYKNL IKMVSYSWTE GQYYRPRIDK
ELLQKYHEGI IVSSACLGGE IPQHIMAGEI AKAEEAILWF KELFGDDYYL EIQRHETHNP
LGNQDVFPQQ QRVNRVILEL GKKLGVKVIA TNDVHFCNEE DAEAHDRLIC LSTGKDLDDP
NRMRYTKQEW MKTTAEMSAI FEDLPETLSN TLEILDKVEL YSIDNKALMP DFPIPPEYKD
DDDYLRFLTY EGARRKYGED LSDEIKERID FELETIKGMG FPGYFLIVQD FIAAARSMGV
SVGPGRGSAA GSAVAYCLGI TDIDPIKYHL LFERFLNPDR ISMPDIDVDF DDDGRAEILR
WVTEKYGKER VAHIITYGTM ATKSSIKDVA RVQRLPLLES NRLAKLVPDK IPGEKKVNLK
KAIEFVPELK QASLSSDKVM RDTLKYAQML EGNVRNTGVH ACGIIIGKTD ISDVVPVSTA
PDKDTKEELL VTQYEGSVIE QTGLIKMDFL GLKTLSIIKE ALVNIKRRHG IDLNIDTIPL
DDPLTYKLYS DGRTIGTFQF ESGGMQKYLR ELQPSAFEDL IAMNALYRPG PMDYIPSFIA
RKHGREPIDY DLPEMEEYLK ETYGVTVYQE QVMLLSRKLA GFTRGQSDEL RKAMGKKLIE
KMNVLKVKFL EGGNKNGHPE EVLEKIWTDW EKFASYAFNK SHATCYSWVA YQTAYLKANY
PAEYMAGALS RNLNNITEIT KLMDECKSMK IGVLVPDVNE SEMKFSVNAN GDIRFGLSAV
KGVGSGAVEQ IIAEREANGL YKDIFDFVER INLSACNRKT MESLALAGAF DSFALSREEY
MAPPLTGREE SYIQALMRYG SVVQEEKHSQ SNSLFGEEED LMIPRPQPSP TEPWNDLERL
NKERELVGLY LSSNPMAQYQ VILDHYCNTH AADLTDPDSL VGKNLVLAGI VTKAFQGISR
SNNPYSKITL EDLSGTGEIP LFGQAHVNFG NYCKEGLYLL IRASVQPHKW KEGEMELVVT
SIELLPQVAD TLIKKMTILL PASKIDNELI EMLSDELTNN SGKTMLFIKV YDHTETFDVE
LAQQKSLIKV SPELVNRLKT YEINFALE
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