Gene PCC8801_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4060 
Symbol 
ID7101862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4254511 
End bp4255650 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content44% 
IMG OID643477053 
Productputative inner membrane protein translocase component YidC 
Protein accessionYP_002374152 
Protein GI218248781 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTG GTGTCGGATT TATTTCCACG AACATTATGC TGCCAATCCT AGACTTCTTC 
TACGGGATTG TGCCTAGCTA CGGTTTTGCA ATTATTGCCT TAACCCTCGT AATTCGCTTC
GGATTGTACC CCCTGAGTGC GGGGCAAATT CGCAATATGC GAAAAATGAA AATTACTCAG
CCCTTGATGA AGGAGCGACA AGAAGAAATT CAGCGACGCT ACAAAGACGA TCCCGCTAAA
CAGCAGGAAG AAATGGGAAA ATTAATGCAG GAGTTTGGCA ATCCCTTGGC GGGTTGTTTA
CCTCTGTTGC TACAAATGCC CATCCTGTTT GCGCTATTTG CTACTCTACG GGGTTCGCCC
TTTGCGAACA TTAACTATAC CGTTGATGTC CAAATTCTTC CGCAAGAGCA GATTGAACGG
GTTGTTCCTC AACCGTTCGC CACAAAGCCT AGCAATATCT ACCTCAGTGA TGGGATTCAC
TACCCCATGT CCGCCTTGTT ACCAGGAGGA AATAAATTAG CTGTTGGAGA CAAGACGACC
GTTGATTTCC AAACACCTGA AGGGCGATCT TTATCTCAAT TAATGGCTGA TCTTCCTGAC
AGTCAAATTA AGCCAACCTT TGAAGTAACC AAAGGCTCAG AACGGCTACA AATTAACCCA
GATGGGACAA TTGAAGCCTT AGCTCCAGGG GATGCTACTA TTCAGGCAAC GATTCCAGGG
ATTGCCTCCA ATACGGGTTT TCTGTTTATT GAAGCCCTAG GACAAGTGGG AGTCGTTGAT
GACGATGGCA GTATTAACTG GGATATCTTA GGAATGATCT TATTCTTTGG TTTAAGTATT
TATCTCAACC AAGAACTTTC CGGAGCGTCA GGAGGCGGTA GTGCTCAGCA GCAACAGGCG
GTTAATAAGA TTACTCCGGT GATTTTTAGC GGAATGTTCC TGTTTTTTCC TCTACCAGCC
GGGGTTTTAA TGTATATTGT TGTGGCTAAC GTTTTTCAAA CCCTGCAAAC CGTCATTTTA
ATGCGGGAAC CTTTACCAGA AAACCTGCAA AAATTAGTGG AACAGCAAGA AAAGGCAGAA
AAAATCAAGG AAGCCCTTCC TTTTGAAAAG CGTTCTAAGA AGAAGGAAAA AACCTCTTAA
 
Protein sequence
MDFGVGFIST NIMLPILDFF YGIVPSYGFA IIALTLVIRF GLYPLSAGQI RNMRKMKITQ 
PLMKERQEEI QRRYKDDPAK QQEEMGKLMQ EFGNPLAGCL PLLLQMPILF ALFATLRGSP
FANINYTVDV QILPQEQIER VVPQPFATKP SNIYLSDGIH YPMSALLPGG NKLAVGDKTT
VDFQTPEGRS LSQLMADLPD SQIKPTFEVT KGSERLQINP DGTIEALAPG DATIQATIPG
IASNTGFLFI EALGQVGVVD DDGSINWDIL GMILFFGLSI YLNQELSGAS GGGSAQQQQA
VNKITPVIFS GMFLFFPLPA GVLMYIVVAN VFQTLQTVIL MREPLPENLQ KLVEQQEKAE
KIKEALPFEK RSKKKEKTS