Gene PCC8801_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3879 
Symbol 
ID7105328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp4062664 
End bp4063647 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content35% 
IMG OID643476883 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002373984 
Protein GI218248613 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTAACA TTCTAATTAC TGGTGCGGCT GGATTTATTG GCTTTCATTT AAGCCAAAAA 
TTATTACATC AAGGAGCAAC TATTATTGGA ATTGATAACC TTAATAGTTA CTATGATGTT 
TCTCTCAAAA AAGCTCGTCT TCAACAGATA GAAACAGACA AAAATTTTAG GTTTTATCAA 
TTAGATATTG CTAACAGAAA AACCATTTCA GAGTTATTTA CTCAGCATAC ATTTGATTAC 
GTTATTCATT TAGCTGCTCA AGCAGGAGTT CGCTATTCCT TAGAAAATCC TCATGCTTAC 
GTTGATAGCA ATCTAGTAGG TTTTGTTAAC ATCTTAGAAG GATGTCGTCA CGGTCGGATT 
AAACACTTAG TCTATGCGTC TTCTAGCTCA GTGTATGGAG CTAATAAGAA AATTCCTTTC 
TCAACAGAAG ATAATGTGGA TCATCCAATT AGTTTATATG CTGCGACTAA AAAAGCCAAT 
GAACTGATGG CTTATACCTA TAGTCATTTG TATCGTTTAC CTACGACTGG TTTAAGGTTT 
TTCACAGTTT ATGGACCTTG GGGTCGCCCA GATATGGCTT ATTTTATGTT CACAAAAGCG 
ATTCTAGCAG GTGAACCCAT AAAAGTCTTT AATAACGGTA AAATGAAGCG CGATTTTACC 
TATATTGATG ACATTGTTGA AGGAATTATT CGAGTCATGA ACCGCATTCC TAATCCCCTA 
GAATCTGAGT TAGGAGTTCC TTATAAAGTT TATAATATTG GTAATAATCA ACCCGTAGAA 
TTACTCAAAT TTATTGAGAT TTTAGAAACC TGTTTAGGAA AAAAAGCCAT CAAAAACTTT 
TTACCGATGC AACCAGGGGA CGTACCGATG ACCTACGCTG ATATTGATGA TTTAATGAAA 
GATGTAGGGT TTCGTCCTGA TACACCACTA GAAATAGGGC TTGAACAGTT TGTCTGTTGG 
TATCAAACTT ATTACCAATC TTGA
 
Protein sequence
MSNILITGAA GFIGFHLSQK LLHQGATIIG IDNLNSYYDV SLKKARLQQI ETDKNFRFYQ 
LDIANRKTIS ELFTQHTFDY VIHLAAQAGV RYSLENPHAY VDSNLVGFVN ILEGCRHGRI 
KHLVYASSSS VYGANKKIPF STEDNVDHPI SLYAATKKAN ELMAYTYSHL YRLPTTGLRF 
FTVYGPWGRP DMAYFMFTKA ILAGEPIKVF NNGKMKRDFT YIDDIVEGII RVMNRIPNPL 
ESELGVPYKV YNIGNNQPVE LLKFIEILET CLGKKAIKNF LPMQPGDVPM TYADIDDLMK 
DVGFRPDTPL EIGLEQFVCW YQTYYQS