| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3855 |
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| Symbol | |
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| ID | 7105606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | + |
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| Start bp | 4036970 |
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| End bp | 4040095 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643476859 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002373960 |
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| Protein GI | 218248589 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT TTATCAAACG CCCCGTTTTT GCCACTGTTT GCGCTTTAGT TATCCTACTG
GTGGGAATAA TTTGTTTATT AACCTTACCA GTCGCTCGCT TTCCTGATAT TAGTCCGACA
ACGATTGAAG TACAAGCCAC CTATAGCGGC GCAAGTGCAG AAGTCGTCGA AAATGCCGTA
ACCAATATTC TAGAACGACA AATTAATGGG GTAGAAGGAC TCAGATACCT GACATCAAGT
AGCAGTAACA ACGGAACCAG TACTATTAGT GCTGTCTTTG ATGCTTCGCG CAATAAAGAC
ATCGCCGCCG TTGATATTCA AAATCAAGTC TCTATCGTTG AATCGCAACT GCCCCAAGAG
GTACAACAGT CAGGTATCTC TGTGACCAAA CAATCGAATA ATTTTTTGTT GGGAATCGCC
TTATATAGTG ACGATAATCG ATACGATAAC GTTTTCTTGA GTAATTACGC CGATCGCTAC
CTCGTTGATA ATTTAAAACG TATTAAAGGG GTCAGTAATA TTCAGATTTT TGGGGAACGT
CGCTATGCTA TGCGTCTTTG GCTTGATGCC AACCGTTTAG CGAGTCGGGG ACTCACCACC
CAAGATGTGG TAGATGCCCT GTCTAAACAA AATCGACAAG TAGGGGCAGG AAAAATTGGC
GGTGAACCTG CCATTGAAGG GCAACAATAT CAACTCGATC TTAGGGCAGT CAGTCAATTA
ACAACCCCTG AAGAATTTAA CAATCTGTTG CTCAAAACCG ATGAAAACGG CGCAATAATT
CGCTTAAAAG ACGTAGGACG CGCAGAATTA GGAGCCCAAG ATTATAACAC CTTCCTGCGG
TACCGTGGCC AAGACGCGAT CGGGATGGGG GTTTTACAGC TAACGGGCTC AAATGCCCTC
GACGTTGCCC ACAAAGTCAA AGAGGAAATA AAAAAAATCG CCCTTTCCTT TCCCCCTGGA
CTGAAATACA CTATCGCTTT TGATACCACG CAATTTGTTG AAGAATCTCT AGCGGAAGTT
GTTAACACGA TTATCATGTC TGTGGTGTTA GTTGTGTTAG TTATCCTCCT ATTTCTGCAA
AACTGGCGCA CGACTCTGAT TCCTTCTTTA ACGATTCCCT TTGCCTTATT CGGAACCTTT
GCTTTTGTTA AATTCTTTGG TTTTTCGATC AATACTTTAA CCCTATTTGG CTTGAGTTTA
GGGACAGGAA TGGTCGTCGA TGATGCGATT ATTGTGGTTG AACAAATCAG TCGCTACATT
GAAGATCAGG GGATGTCTCC CTATGAAGCG ACTATTCAAG CCATGAGAGA ATTATTTAGC
GCAGTCATTG CGACCTCTTT GGTGTTAATG GCAGTATTTA TCCCTGTCGC TTTCTTTCCT
GGGACAACAG GGGCATTATA TCAACAATTT GCCTTAACTA TTGCTTTTTC CATCACTATC
TCCACCTTTC TCGCTGTCAC CTTAACCCCT GCCTTGTGTG CTTTAATTCT CAGGAAAGGA
CAAGGGTTTC CCGGGTGGGT CGGGGTGATG TTCCATCGCT TTAATGAGTT TTTAGACTGG
GTTAGACGAC AATATCGGCG ATCGCTTTTA GGGTTAGTCC AGATTAAACG GTTAATGGTG
GGAGTCTTTA TTCTTTTACT AGGCCTAACC GCTTGGCTTT ATCTGAAAGT TCCTACCGCG
TTCCTCCCCG ATGAAGATCA AGGCTATTTT CTAACCATTA TCAAAGCTCC TGACGGCGTA
TCGCTGCAAT ATACCAATGA GGTGATGCGA AAAGTGGAAA CCGCAATTTT AGAAGAACCC
GAAATTGACG GAACTTTTGC GATCGCCGGG TTTAGCGTCA CCGGAAGTAG TGCCAATGAT
GCGGTCATTT TTAGCCCCCT CAAGCCTTTT TCTGAACGCC GCAGTCCCCA AAATTCAGCC
CAAGCGGTTA TTGGACGACT TTGGGGAAAA TTTCCCCAAA TACCTGAAGC CCAAATTTTC
CCGGTTAACC CCCCATCTAT CCAGGGATTA GGCAGTTTTA GCGGGTTTAA CTTCCAATTA
CAAGATCGCT CAGGGTCCGA AGATATCAGC ACGCTAGTCG AGGCCGCCGG GCAATTATTA
GGATTAGCCA ATCAAAGTCC CCAATTAGCC GGAGCTTTTA GTCGGTTTTC TGCTAATACT
CCCCAATTAT TAATCGAAGT GAACCGCAAT AAAGCTCAAG CCCTCCAGGT TTCTATTGAT
GATATTTTCA GTACTCTCCA AACCGCGTTA GGGTCACGGT ATGTCAATGA TTTCACCCTC
CAACAACGAA CCTATCGGGT TTATGTGCAA GCTGATCGAG AATTTAGATC GAACCCCGAT
GATATTAAAA AGCTCTATGT TCGCTCAGCA ACGGGTCAAA TGATTCCTCT GTCTAACTTA
GTGAAGGTGA CTTCTACGGT CGGACCCCAA ACAATTAATC ATTATAATCT CTACCGCTCT
ACTGAAATTA ACGGCGATGC AGCCCCTGGA GTTAGTTCTG GACAAGCCAT GCAAGCAATG
GCAATGGCAG CCAAACAAGC TCTACCGCAA GGGTTTGGTT ATGAATGGTC AGGAATTTCT
TTAGAAGAAA TCGAATCAGG AGGTTTAGCT CCGATTATTT TCGGATTAGG CTTAATTTTT
GTCTTTTTAG TCCTAGCAGC CCAATATGAA AATTATATCG ATCCATTTAT TATTCTTTTG
GCGGTTCCTT TAGCCATTTT AGGTGCATTA ATTGCTCAAA GTTTACGCGG ATTTCCTAAT
GATATTTACT GTCAAATTGG GTTAGTTATG TTGATTGGAT TAGCTAGTAA AAATTCGATT
CTTATTGTAG AATTTGCTAA CCAATTACGG GAAGAAGGTT TACCTATTGT GAAAGCCGCC
GTAGAAGCTG CCCAAGAACG ACTCAGACCC ATTGTTATGA CAGCTTTTTC AACTTTATTA
GGGACTTTAC CCTTAATGAT TGCAACAGGA GCCGGATCCG GAAGTCGTCA ATCTTTAGGA
ACAGCCGTTT TTGGGGGAAT GTTTATCGCT ACTTTTTTAA GTTTATTTCT CGTTCCTATT
TTGTATATTA TGGTTAAAAT AATGACTGAA AAAATCTCAA ATTCGAGCCT AGAAAATAGG
GAATAA
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| Protein sequence | MDFFIKRPVF ATVCALVILL VGIICLLTLP VARFPDISPT TIEVQATYSG ASAEVVENAV
TNILERQING VEGLRYLTSS SSNNGTSTIS AVFDASRNKD IAAVDIQNQV SIVESQLPQE
VQQSGISVTK QSNNFLLGIA LYSDDNRYDN VFLSNYADRY LVDNLKRIKG VSNIQIFGER
RYAMRLWLDA NRLASRGLTT QDVVDALSKQ NRQVGAGKIG GEPAIEGQQY QLDLRAVSQL
TTPEEFNNLL LKTDENGAII RLKDVGRAEL GAQDYNTFLR YRGQDAIGMG VLQLTGSNAL
DVAHKVKEEI KKIALSFPPG LKYTIAFDTT QFVEESLAEV VNTIIMSVVL VVLVILLFLQ
NWRTTLIPSL TIPFALFGTF AFVKFFGFSI NTLTLFGLSL GTGMVVDDAI IVVEQISRYI
EDQGMSPYEA TIQAMRELFS AVIATSLVLM AVFIPVAFFP GTTGALYQQF ALTIAFSITI
STFLAVTLTP ALCALILRKG QGFPGWVGVM FHRFNEFLDW VRRQYRRSLL GLVQIKRLMV
GVFILLLGLT AWLYLKVPTA FLPDEDQGYF LTIIKAPDGV SLQYTNEVMR KVETAILEEP
EIDGTFAIAG FSVTGSSAND AVIFSPLKPF SERRSPQNSA QAVIGRLWGK FPQIPEAQIF
PVNPPSIQGL GSFSGFNFQL QDRSGSEDIS TLVEAAGQLL GLANQSPQLA GAFSRFSANT
PQLLIEVNRN KAQALQVSID DIFSTLQTAL GSRYVNDFTL QQRTYRVYVQ ADREFRSNPD
DIKKLYVRSA TGQMIPLSNL VKVTSTVGPQ TINHYNLYRS TEINGDAAPG VSSGQAMQAM
AMAAKQALPQ GFGYEWSGIS LEEIESGGLA PIIFGLGLIF VFLVLAAQYE NYIDPFIILL
AVPLAILGAL IAQSLRGFPN DIYCQIGLVM LIGLASKNSI LIVEFANQLR EEGLPIVKAA
VEAAQERLRP IVMTAFSTLL GTLPLMIATG AGSGSRQSLG TAVFGGMFIA TFLSLFLVPI
LYIMVKIMTE KISNSSLENR E
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