Gene PCC8801_3338 details

Gene Information

• Locus tag: PCC8801_3338
• ID: 7105194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 3484790
• End bp: 3485332
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643476354
• Product: CheW protein
• Protein accession: YP_002373464
• Protein GI: 218248093
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTTTTA ACACACTATC CCCCTTATCG ACCCCAGATA CTCAGGATCA CCGTAACCTG 
CAACAGTTTC TTCAGTTACA TCTGGTTCCT GATACTACCC TGATGCTGCC CGTTGCCCAA 
CTAACCGAAG TCTTAAGTAT TCCTTTAGGG CAAATTGTCC CTATTCCCCA AATGCCTTCT 
TGGATTATGG GAGTCTACAA CTGGCGAGGA CAGGTACTTT GGTTAGTCGA TTTAGGAGAA 
TTACTCGGAC TTACGCCCTG GCATCAACAA AACTTGACCA CTCCCGTACA TCGTGCCGTG 
GTCTTGCACT CCACCCCCAA GGCTGCCTCT GGGACTCCCT CAGTCCGTTA TACCCTAGGA 
CTGGTCGTCA GTCATATTGA CGAGATGGAA TGGTGTCAGC CTTCAGAGAT TCAATCTCCC 
CCTACTTCAG CCGTTACGCC GAGTTTAGCT CCTTTTTTAC GAGGTTATTG GTTAAATCCC 
CAAGGAAAAA TGCTCATTGT TCTCGATGGA GAGGCCATTA TCGCCGCTAT GCCTAAATCT 
TAA 

 

Protein sequence

MVFNTLSPLS TPDTQDHRNL QQFLQLHLVP DTTLMLPVAQ LTEVLSIPLG QIVPIPQMPS 
WIMGVYNWRG QVLWLVDLGE LLGLTPWHQQ NLTTPVHRAV VLHSTPKAAS GTPSVRYTLG 
LVVSHIDEME WCQPSEIQSP PTSAVTPSLA PFLRGYWLNP QGKMLIVLDG EAIIAAMPKS