Gene PCC8801_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3263 
Symbol 
ID7105918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp3408725 
End bp3409831 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content40% 
IMG OID643476282 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_002373392 
Protein GI218248021 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAC AGACAATTTC TAAGTACGCG GCTCAGATCG AAGATTTAAT CGTAATTGTT 
CAAAAACTTT CCTTAGCGCG TAATTTAGAG ACTGTAATGA ATATTGTTAA ACAATCAGCT 
CGTCAATTAA CCCAATCTGA TGGTGCAACC TTCATTTTGC GAGATGGAGA GAATTGTCAC 
TATGTCGATG AAGATGCGAT CGCACCTTTA TGGAAAGGTC GCCGTTTTCC CCTCAGGATC 
TGTATCGGTG GATGGACGAT GAATAATCGG CAATCGGCTA TTATTTATGA TATTGCCCAA 
GATAGCCGCA TTCCCTACGA AGCTTACGAA CCAACTTTCG TCAAAAGTTT ATTAACAGCC 
CCCATTCGTC AAATTGATCC CATCGGAGCT ATTGGAATTT ATTGGTCAGA TTATCATCAA 
CCCTCTTCAG AAGAAATCAA ATTACTTCAG GCCTTAGCCG ATTCTACCGC CATTGCCATG 
GAAAATGTAC AGCTTTATAG TGAGTTAGAA GAGCGGGTGA AACAACGGAC GACTCAATTG 
CAAGTCATGA ATGAACATTT GCGCGAAGAA ATTATAGAAC GACACAAAGC CGAAGAAGAA 
GTCCGACAAC TATCTTTAAC CGATGAATTA ACCCAATTAT CCAATCGACG TGGGTTTAAT 
TTCCTTGCTC AACGAGAATT GGATAATGCT CACCGACGTT CTTATTACTC TACCCTATTT 
TTCATTGATC TCGATGGTTT AAAACCCACT AACGATACCT ATGGTCATGA ACTGGGGGAT 
CAAATGATCA AAGATGCTGC TCACATCCTT AAGCAAACGT TTCGAGAAAC CGATATTATT 
GCTCGTTTAG GAGGTGATGA ATTTGCGATT TTAACGGCGG CCGAAGAGGA TGATCATAGT 
CAAGAAATTG GTGATCGCTT GTTGGATAAC ATAACCAACT TTAATAGTCG CTCTCAACAA 
CATTATCAAG TTTCTTTTAG TATCGGTCAA GTGACCTATA ATCCTAATTC AGATGAATCA 
TTAGACTCTT TACTGGTTCG AGGAGATCAA GCAATGTATC TTCACAAGAA AAACAAGAAA 
CGCATAGAGA GAGAAGACAC AAAATAA
 
Protein sequence
MRGQTISKYA AQIEDLIVIV QKLSLARNLE TVMNIVKQSA RQLTQSDGAT FILRDGENCH 
YVDEDAIAPL WKGRRFPLRI CIGGWTMNNR QSAIIYDIAQ DSRIPYEAYE PTFVKSLLTA 
PIRQIDPIGA IGIYWSDYHQ PSSEEIKLLQ ALADSTAIAM ENVQLYSELE ERVKQRTTQL 
QVMNEHLREE IIERHKAEEE VRQLSLTDEL TQLSNRRGFN FLAQRELDNA HRRSYYSTLF 
FIDLDGLKPT NDTYGHELGD QMIKDAAHIL KQTFRETDII ARLGGDEFAI LTAAEEDDHS 
QEIGDRLLDN ITNFNSRSQQ HYQVSFSIGQ VTYNPNSDES LDSLLVRGDQ AMYLHKKNKK 
RIEREDTK