| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3141 |
|---|
| Symbol | |
|---|
| ID | 7102442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3287579 |
|---|
| End bp | 3288586 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643476166 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002373277 |
|---|
| Protein GI | 218247906 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAT CTGCATCTTT GCCTGATATT TACCTGAGCT TTTTTATGTT CACCACGAAC
TTACAACCCG ATAATTTAGC ATATCGGAAA GTCGTCGTTG ATCATATTAA ACAGCTACAA
ACCTTTGGTT ATAGTGGGTT TGAATTTCCC ATTGCTCCCA CCTTTGGCAG CGATTTTAGC
CAAGATATTC AAAATTATGC CGATTTGCGC CAATATTTAG ACGATCAAGG CTTAAGCGCG
GTTAAAATAG CGACTAATGT TGGATGTACC CGAACCTACG ATCCCACTTC TCCCTATCCC
GAACAACGAC AAAAAGCCCT AGCCTATCTT AAATCACGGG TAGACATTAC CCACGCTCTA
CGGGGGGAAA TTATGATGGG ACCCATCGTT ATCCCCTATG GTGTCTTTCC TACGACCGAT
TTTAACGAAC CGATCTGGAG TGATCAACTC CAAGATGAGT TAGCAGTACG GTATCAGACA
GCCCAACCCG TACTTAATGA ATTAGGGATC TATGCAGCGC AAAAAAACGT TAAATTAGCC
ATTGAACCCA TCACCCACTG GGAAACCCCC GGACCTAATA AACTATCCCA ATTAATGGAC
TTTCTCGACG GGGTAGACTG CAAACAGGTA GGAGTCGTCA TCGATAGTGC TCACGAAACC
CTAGATGGAG ATGGTCCAGA AATCTTTAAA ACCCAAGTCG CTGAACTCGC GCGACAAGGA
CGACTCCATT ATATCCAAGT CTCTCCCCCC GATCGCGGCG CATTGCATAC CAGTTGGATA
CCTTGGCAGT CCTTTCTCGA ACCCGTCTTA GATGTGTATA ACGGTCCGAT TGCTGTCGAA
ATTTTTAACG CTATTCCCGC TTTTATTGGG TCTTTACGGC TATCTCGGCG CAAATTCTGG
ATACCAGGAG AAGATACACC TAATACCTAT CCTAGTGCCT ATGATATCGC CCAGAAAGCG
ATCGAAGCAA CCCAACGGGA AATCAACCAG GTTCTTGATC TTGCCTAA
|
|---|
| Protein sequence | MSKSASLPDI YLSFFMFTTN LQPDNLAYRK VVVDHIKQLQ TFGYSGFEFP IAPTFGSDFS
QDIQNYADLR QYLDDQGLSA VKIATNVGCT RTYDPTSPYP EQRQKALAYL KSRVDITHAL
RGEIMMGPIV IPYGVFPTTD FNEPIWSDQL QDELAVRYQT AQPVLNELGI YAAQKNVKLA
IEPITHWETP GPNKLSQLMD FLDGVDCKQV GVVIDSAHET LDGDGPEIFK TQVAELARQG
RLHYIQVSPP DRGALHTSWI PWQSFLEPVL DVYNGPIAVE IFNAIPAFIG SLRLSRRKFW
IPGEDTPNTY PSAYDIAQKA IEATQREINQ VLDLA
|
|---|
| |