| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_2828 |
|---|
| Symbol | |
|---|
| ID | 7104357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 2917590 |
|---|
| End bp | 2918330 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643475864 |
|---|
| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
|---|
| Protein accession | YP_002372983 |
|---|
| Protein GI | 218247612 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACA TTCCAGAGGC ATTAAGAGAA GCTTCAACCT CCAATCCGAT GTCGCGTCAG
ACATCAGGAT TATTGATGGT GGGAGGATTA AGCATAGGAG TCCTAATCGT CATAGGAGGA
CTGGTTTTAA TGCGTCCTGG TTCCCAACCT GTCCCGACAA CTCCTGTAAC GACAACCCCA
GAACCTGTCT CAAGTCCTTC TCCTGAACCT GTAGACAATA TTTTGGGACA TTTACCCTAT
AAAGAGGCTT CTTTATCCCA ATTAAAAGCC ATTACCCCCG ATGGACGCAT TAAATTGCGC
TTAACTGCTG CGGATGAGTT TCTCAAAATG CAAGCCGCCG CGCGATCGCA AGGAGTGATT
TTAGCTCCAA TTTCGGGATT TAGGACAGTT AACGAGCAAA ATTACTTATT TTTTGAAGTT
CAACGACAAC GCAATCAAAA TCCCAGCAAA CGAGCCGAAG TGAGTGCGCC TCCTAACTAT
AGCGAACACC ATACAGGGTA TGCTATTGAT ATTGGCGATG GTAAAGCTCC AGGAACTAAT
CTTACTCCAA GTTTTGAGAA CACGGCTGCC TTTAATTGGT TACGCAATAA TGCAGCTAAA
TACAGTTTTG AGCTATCCTT TCCCCCGAAT AACCCCCAAG GAATTAGTTA TGAACCGTGG
CACTGGCGAT ATGTGGGAGA TCAAGATAGT TTAGAAACAT TTTATAAAGC AAGAAACTTA
CAACAAAAAC CTTCAAACTA A
|
|---|
| Protein sequence | MDDIPEALRE ASTSNPMSRQ TSGLLMVGGL SIGVLIVIGG LVLMRPGSQP VPTTPVTTTP
EPVSSPSPEP VDNILGHLPY KEASLSQLKA ITPDGRIKLR LTAADEFLKM QAAARSQGVI
LAPISGFRTV NEQNYLFFEV QRQRNQNPSK RAEVSAPPNY SEHHTGYAID IGDGKAPGTN
LTPSFENTAA FNWLRNNAAK YSFELSFPPN NPQGISYEPW HWRYVGDQDS LETFYKARNL
QQKPSN
|
|---|
| |