Gene PCC8801_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1578 
Symbol 
ID7102337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp1653612 
End bp1654226 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content39% 
IMG OID643474649 
Productmethylthioribulose-1-phosphate dehydratase 
Protein accessionYP_002371786 
Protein GI218246415 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG ATCCTCGTCC TGAGTTAATC ACTGCTGCCC GTCAATTTTA TCAACAAGGT 
TGGATGATGG GAACTGCGGG GAATCTTTCC GCAAAACTTC CTGATAATAG CTTTTGGATT 
ACTGCTAGTG GAAAAAGTAA AGGTAAGCTA ACAGAAAGCG ATTTTGTTCG GGTTAATTTA 
GACGGCAAAG TCATTGAATT ACCCGATAAT AATAACCGTC CTTCCGCAGA AACCAGTATT 
CATCAAACGA TTTATCAATG CTTTCCTAAT GCCCATGCTT GTTATCATGT TCATTCCGTA 
GAAGCTAACT TAATTTCTCG TTGTGTTAAG GGAGATAATC TGGTTTTACC CGCAATTGAA 
ATGCTTAAAG GGTTAGGAAT ATGGGAAGAA AATCCTAACG TTGTAATGCC AACTTTTAAA 
AATCATTTAG ACGTACCCCG TATTGCCCAA GAAATCCGCG ATCGCTTCTC AAGAAAACCC 
CCCGATGTTC CTGCTCTTTT AATTATTGAT CATGGGGTAA CAGTTTGGGC AGATACGACA 
GAACAAGCTG CTAATTATCT TGAAATAGCT GAGTATTTAT TTCGGTATCT AATAGCAGCA 
CGTCAAGTAG AATAA
 
Protein sequence
MNYDPRPELI TAARQFYQQG WMMGTAGNLS AKLPDNSFWI TASGKSKGKL TESDFVRVNL 
DGKVIELPDN NNRPSAETSI HQTIYQCFPN AHACYHVHSV EANLISRCVK GDNLVLPAIE 
MLKGLGIWEE NPNVVMPTFK NHLDVPRIAQ EIRDRFSRKP PDVPALLIID HGVTVWADTT 
EQAANYLEIA EYLFRYLIAA RQVE