| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1565 |
|---|
| Symbol | |
|---|
| ID | 7104196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 1641233 |
|---|
| End bp | 1642558 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643474636 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002371773 |
|---|
| Protein GI | 218246402 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCT CTCCTAGTTT AGCTGCCATT CCGCCGATTG AAATTGCCCT CGCGCAGTAT
CAATTAGCCC TTGCTGCTTG GGAAAATGAA AGCAACCAAT CAACTGAAAA TGCTTTAAAA
ATTCTCACCA CCAGAGAGAC AGTACAAAGA CTATTAGACG TTGAAAAAAA AGTTCCTTCA
ACGATTTTAC AAACCTTAGT AGAATTAGAT AAAAAGTTAG AAAATAACGC AGTTTCTTTA
ACTCAGATTC TTGATTTAGC CGTCTATCGT CATAGCCTTT CCATTTCCCC TCAAGGGTGG
TGGTGGAGTT TAGATGAAAC AGTCAAAGAA AAAGAATTAG CAGGACAGCT ATCTTGGCTG
TGGAAAGGAG CTAGAATTGG CGTTTGGACA ATCAATTTGG GATTATTAGG AACCTTAGCA
ACACGCTTTT TTAGTGGTGC ATCGGGGTTA GGAGAAATGT TAGCGATCGC CTTACCGAGT
ATTTTAGTCT TATTACAAGC CAATAATGAA CTCACTTCTG CGGGACGCGA AGGATTTAAT
CGACTCTGCG ATCGCTTAAA AATTCCTAAA CATTTACAGG AAGAAGCAAG ATTAATTCCA
ACGGTTTCTT TATTTGTCAT TCTATTAGTT ATTTGGTTTC TGCAACCGCA ATTTTCTCAA
GGGATGAACC AAGAAGGAAG ACGAGCCCAA CAACGCGGAC AATTAACTCA AGCAGAACAA
CATTATTTAA AAGCCATTGC TCTATCTGCT AATAATTTAG ATGCGACTTA CAATTTAGGC
AATCTCTACG AAGAACTCCA AAATTTTGAT AATGCTGTGA AATACTACAT TATTGCAGCT
AAAGGAGGAA TCCCAGAAGC TTATAACAAT CTTGCCCGTC TTTATATTAG ACAAAATAAA
TATCCAGAAG CCGTTATTTT ACTCAAAGAA GGGTTAAGCT TAATTGATAC CGAAGAACAA
AAAGAAAGTC CCCCTCCTGT TAATTTGGGA GAAGTAAAAT ACAGTATCTT AAAAAACTTA
GGATGGGCAA AATTACAGCA ATCTCAACCC GAAGAAGCGC AAGGTTATCT ATTCGCAGCC
ATTGGAATTG CCAGTGATCC CCAAATTCAG CCCTATATTC CCAATCCAGG GGCGGCTCAT
TGCCTTTTAG CCCAAGTATT AGAGTTACCG CCAAAACAGC CTTCTCTTGC CCTAGAACAA
TGGCAACAGT GCTATACTTT GATTGAGAAA CGGTTAGCTG CTGGAGAAAT TCGCAATCCA
GAAGAAGAAA CTTGGTTTTC TTTGGCTAAA CAAAAGTTAA CTTCTCAAGC AAATTCAACT
CCATAA
|
|---|
| Protein sequence | MTSSPSLAAI PPIEIALAQY QLALAAWENE SNQSTENALK ILTTRETVQR LLDVEKKVPS
TILQTLVELD KKLENNAVSL TQILDLAVYR HSLSISPQGW WWSLDETVKE KELAGQLSWL
WKGARIGVWT INLGLLGTLA TRFFSGASGL GEMLAIALPS ILVLLQANNE LTSAGREGFN
RLCDRLKIPK HLQEEARLIP TVSLFVILLV IWFLQPQFSQ GMNQEGRRAQ QRGQLTQAEQ
HYLKAIALSA NNLDATYNLG NLYEELQNFD NAVKYYIIAA KGGIPEAYNN LARLYIRQNK
YPEAVILLKE GLSLIDTEEQ KESPPPVNLG EVKYSILKNL GWAKLQQSQP EEAQGYLFAA
IGIASDPQIQ PYIPNPGAAH CLLAQVLELP PKQPSLALEQ WQQCYTLIEK RLAAGEIRNP
EEETWFSLAK QKLTSQANST P
|
|---|
| |