Gene PCC8801_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1143 
Symbol 
ID7102296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp1197276 
End bp1197983 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID643474231 
ProductThf1-like protein 
Protein accessionYP_002371369 
Protein GI218245998 
COG category 
COG ID 
TIGRFAM ID[TIGR03060] photosystem II biogenesis protein Psp29 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAAA TTCGTACCGT TTCCGATACC AAGCGCGATT TCTATAACCA TCATACTCGT 
CCGATAAACT CTATTTATCG ACGTTTCATT GAAGAGTTGT TGGTAGAGAT GCACTTGCTC 
TGTGTTAACA TTGATTTTCG CTACGATCCT ATCTATGCGT TAGGAGTTGT TGCCTCCTTT 
CAACAATTTA TGCAAGGGTA TCGTCCTGAA GAGGACAAAA ATTCTATTTT TTCTGCCCTC 
TGTCAAGCTG TTGGAGGTGA TGGGGAAAAG TATCGTCATG AGGCTCAAAC ACTCTTAAAC 
CAAGTTAAAG GGATGTCGGT GTCAGATCTA ATCGCCATGG GGAACTCCGC CAGGACCGGG 
GAACCTGGTG AGGGAATGCT ATATAACACA TTACAAGCGA TCGCCAAAAA TCCTCAGTTT 
AAATACAGTC GCCTCTTTGC GATTGGCCTA TATACAATGG TCATGGAAAT CGATGCTGAT 
TTGCTCAAAG AGCAAGACAA ACGTAATGAA ACCTTTAGTC AACTCTGTAA TGGCTTAAAT 
TTATCTTCTG ACAAGCTACA AAAAGATCTC GATCTTTACC GTAGTAATGT TGATAAAATG 
GGGCAATTAC TCGCCGTCAT TGAAGATGCT TTAGAAGCTG AACGTAAAAA ACGAGAAAAA 
GCCAAACAAG AAGTAGCAAC AACCCCCGAA GATAGTCCAG CTAACTAA
 
Protein sequence
MDKIRTVSDT KRDFYNHHTR PINSIYRRFI EELLVEMHLL CVNIDFRYDP IYALGVVASF 
QQFMQGYRPE EDKNSIFSAL CQAVGGDGEK YRHEAQTLLN QVKGMSVSDL IAMGNSARTG 
EPGEGMLYNT LQAIAKNPQF KYSRLFAIGL YTMVMEIDAD LLKEQDKRNE TFSQLCNGLN 
LSSDKLQKDL DLYRSNVDKM GQLLAVIEDA LEAERKKREK AKQEVATTPE DSPAN