Gene PCC8801_0294 details

Gene Information

• Locus tag: PCC8801_0294
• ID: 7105357
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 283423
• End bp: 285480
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 643473404
• Product: integrins alpha chain
• Protein accession: YP_002370550
• Protein GI: 218245179

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTA ATCTATTATT GCAATCAAGT TGTAGAAATA AGTTTTTAAT ACTATTTTTG 
ACTATTTTAC TATTGATTAT TCCTCTTCAA TACCACTACT CTCAAGATAT AACTAGCAAG 
TGGTTTATCA GCAAACCGAT AGTTTTCAAT GCTTACAATT TATTTGACGT AGGTGTCACT 
GATATTAACA ATGACAATAA TCTTGACATA TTTACGACCA ACCATAATTC TCTAAATAAT 
TTAATGATTG GTGATGGCAA GGGAAATTTT ACTGATGTAG TTTCTCAGTG GAAGTTTGAC 
CATATTGCCG AATTTCCAGG ATTCGCTGAT TCAGAAAAAG AACCTAAATT TGAGACTCCC 
GGATTATATG TATTTTGGCA GAAGAGAACC TTGATAATCA AAAATTATAA AATGAATAAT 
CCTCAACAAT TAGATGGAGA AATCAAAATA TTATCAGAGG TTAAGATTGA GAATGATTCA 
TTAAGTAAAG TAAGTTTCAC ACAAAACCAG TTATCTAACT CAGAAGTAAA GACACAAATT 
AATTTTGAAC TCGCAAAAGA TAGCTGGTTA ACAATAACTC CTAAAGATCC TATGCAAACT 
TCTTTACAAT TGAATGAAAA TATTCCCTTG AAGAATGTTT ATGTCGGTCT TCAAAAAGTA 
AATCCAAAGA CTCATAATTT AGATTTGAAA ATTTTAAGAG ATCGCCATAG TATTTCTTGG 
GCAGACTATA ACAGTGATGG AAATATTGAT GCCTTTATAA CTCGTAGTGG AGGCAGCCTT 
AGTTCTAAAG AACGTTTTAG GAAAATTTTT CAGCGTCATC TTTTATCTAA TCGAGGTAAC 
TTCTTTGAAG ACGTGACTGA AAAATCAGGA ATTGTAGAGA CTGCTTGTCG AGCAGTTACA 
GCAGCATGGG TTGATTTTGA TAACAACAAC AGTCTTGAAC TTTATGTTGT GTGTATTGAT 
GGAACAAGTC GTTTATATCA AAAGAACAAT AACGGAAAAT TTGTTGATAT TGCTGTAAAA 
GTTGGACTAA GTCCATCACA AACTACTCCT GACCAAGCAG GTTGGAATAA AAACGGGCTT 
TTTGTTTGGC TTGATACGGA TGCAGATGGA GACGTAGATT TATTAAGATC TTATCAAAAT 
TCCTTGAAAT TGTATGTTAA TGAATTAGGC TTATTTAAAG AAAAAACAAT TACTCCTCAC 
TCTCCGTTAA TAGATATCTT TAGCTCAAAG TTTAGCGTTA CAGATTATGA TTTAGATGGA 
GACTTAGATA TTCTTTTTGT TTCAGGATAT GGAAGCATCT TGTTAAAAAA CCTAGATGGA 
GAGTATGCTT TAACTAATCC GAGTAATATT GGTTTGCCTG ATAATCCCTT AATAGCTAAT 
TGGGTAGATT ATGATAATGA TGGTTTCCCA GATGTCCATA TGATACCAGG GGGAATTTAT 
CATCAGCTAC CTAACCATAA TTTTACCAAA GCACATATTT TGGATCGTGA ATTTATTGGT 
TTATCATTTC CTCTAGATCC TCAATGTATT TGGTTTGATT TTGATAATTC TGGAACTCAA 
GACGTGCTCA TGACATCTTT ACCTTATCAT CATTGGAAAT CAGTTTTTTG GAATTTTTCA 
GTCTCCCCTA ATATGAGTTT TATCAATGGT TGGCTTCAGA GAAATTTACA TCCTCACAGT 
GAGTTTAAAA ATCTTAGGGA AGACCGCCTA AAAACGGCTG ACCATACAAA AAGTGACTTT 
GTTTGGCAAG GAAAACTTTA TGGTAATATT AACTCTCAAA ATCACTGGCT TCAGATTAAG 
CTAATAGGTC TGCCTAAAAA TCCTCAAGCA ATAGGTGCTA AAGTAATTAT GGTTACTGAT 
CATGGTCAAC TCTTGCAGCA GGTTGGAGCA ATGGAAAACT CTCGTTACTC CCAAGGGTAT 
TCTCCCTTGC ATTTTGGTTT AGGAAAGAAC AAAAGGCCTA AGCTTATTAA AATTTTTTGG 
AATGACGGCA AATTCCAAGA AATTCAACAG CCTGAAGGAG ATAAACTATT AATCATTAAA 
CGGGAATCTA ACTTGTAA 

 

Protein sequence

MKLNLLLQSS CRNKFLILFL TILLLIIPLQ YHYSQDITSK WFISKPIVFN AYNLFDVGVT 
DINNDNNLDI FTTNHNSLNN LMIGDGKGNF TDVVSQWKFD HIAEFPGFAD SEKEPKFETP 
GLYVFWQKRT LIIKNYKMNN PQQLDGEIKI LSEVKIENDS LSKVSFTQNQ LSNSEVKTQI 
NFELAKDSWL TITPKDPMQT SLQLNENIPL KNVYVGLQKV NPKTHNLDLK ILRDRHSISW 
ADYNSDGNID AFITRSGGSL SSKERFRKIF QRHLLSNRGN FFEDVTEKSG IVETACRAVT 
AAWVDFDNNN SLELYVVCID GTSRLYQKNN NGKFVDIAVK VGLSPSQTTP DQAGWNKNGL 
FVWLDTDADG DVDLLRSYQN SLKLYVNELG LFKEKTITPH SPLIDIFSSK FSVTDYDLDG 
DLDILFVSGY GSILLKNLDG EYALTNPSNI GLPDNPLIAN WVDYDNDGFP DVHMIPGGIY 
HQLPNHNFTK AHILDREFIG LSFPLDPQCI WFDFDNSGTQ DVLMTSLPYH HWKSVFWNFS 
VSPNMSFING WLQRNLHPHS EFKNLREDRL KTADHTKSDF VWQGKLYGNI NSQNHWLQIK 
LIGLPKNPQA IGAKVIMVTD HGQLLQQVGA MENSRYSQGY SPLHFGLGKN KRPKLIKIFW 
NDGKFQEIQQ PEGDKLLIIK RESNL