Gene PCC7424_5680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5680 
Symbol 
ID7113007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011738 
Strand- 
Start bp62172 
End bp62864 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content53% 
IMG OID643483968 
ProductHhH-GPD family protein 
Protein accessionYP_002380977 
Protein GI218442657 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAATCT TGGAGGAAAA GCGACTCTCC GCCCTGGTAG ACGGCAAGCT CAAGGCTTAT 
TTGCGTAAAA AGCTCAGGAA GTGGGGAGAG AGGAACTTTA GAGATTTCCC CTGGAGGCAC 
ACCCGCGATC CCTACGCCAT CCTGATAGCG GAAATCTTGC TTCAACGCAC CTCCGCCCGT 
ACCGTCGCGC CGGTCTACTT GGAGTTCCTA CGACGCTATC CGACACTGAT GACTTTATCA 
CAAGCCCGTG AACACGAGTT ATCCGACCTA ATGCGACCCT TGGGACTGCG GAGTAGAGCC 
GCGAATTTGA AGCGACTGGC AATAACGGCC ATCGCACTCT ACGGTGGCGA GTTACCGGAC 
TCGGAGGAAG AACTATTAAA GTTGCCCGGT GTCGGCAAAT ATACGGCCAG GGCTGTATGT 
GCCAACGCCT ACGGTCATCC ATTGGCTGTT TTAGATGTCA ACGTCGCTCG CATTCTACGA 
CGCTTCTTCG GATTTGACGG GACAAAAATT GAAAGGCGCG ACGCTTTTCT GTGGTCGGTA 
GCCCAAGCTG TTGCCCTCAA GCGGGAAACC GATAGATGGA ATTTGACGCT GATCGATTTC 
GGGGCTGAGG TTTGTAGGGC GACAAAACCA AATTGCAGAG ACTGTCCGCT ACGCGGTAAA 
TGTCAATTTT CGCTCAACCT CTTGGGGAAC TGA
 
Protein sequence
MRILEEKRLS ALVDGKLKAY LRKKLRKWGE RNFRDFPWRH TRDPYAILIA EILLQRTSAR 
TVAPVYLEFL RRYPTLMTLS QAREHELSDL MRPLGLRSRA ANLKRLAITA IALYGGELPD 
SEEELLKLPG VGKYTARAVC ANAYGHPLAV LDVNVARILR RFFGFDGTKI ERRDAFLWSV 
AQAVALKRET DRWNLTLIDF GAEVCRATKP NCRDCPLRGK CQFSLNLLGN