| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5485 |
|---|
| Symbol | |
|---|
| ID | 7112700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011737 |
|---|
| Strand | + |
|---|
| Start bp | 142414 |
|---|
| End bp | 143364 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643483866 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002380875 |
|---|
| Protein GI | 218442554 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1533] DNA repair photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.269586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA CAGGAATTGA AGAAATCATC AACCCACTTC AAGAAAGTAA ATTGAATAAA
AAAGGACTAT GCGATTATGT TATAAATGTT GCTACGGGCT GTACTCATGG TTGCTCATTC
TGTTATGTAC CGTCGACTCC AGTAATCCGA ACAAATCAAC AACATTTAAA AGAGAAAGGG
ATCAATGATC CTCAACTAGA TTGGGGAAAA TATCTGTTAA TCCGCGAGGA TATCCCTGAG
AAACTAACAG AAGTATTGGA AAAAAAGAAG ACATGGAAAA CAACACCATC GGGAAAGGGA
GTGGTATTAT TATCCTCTGG TACTGATCCT TATCAAAATA AACAAACTGC AAAAATTACT
CTGGGTGCAG TTGAAATTCT CTTAAAACAT AAAAAACGTA TTAGAATTTT AACTCGTAGT
CCGTTATGGT TAAATCATTT AAATACATTA GTCGATAATA ATATCACGGT GGGAATGAGT
TTACCCTATC TTGACGACGA ATTATCCCGT AAAATCGAAC CCTTTGCACC ACCACCCAGT
TTACGTTACA ACGCCTTATT GAAAGGGCAT CAAAGAGGTT GTAGGCTATA TGTGGCAATT
GCACCCACTC CACCGATGAT GAAATTAGAT GATTTTCAAT ATTATCTAGA GAAAATCATG
AAATTTAAAC CGGAAGTAAT ATTTTGGGAG CCGATTAACG CAAGGGGGAG TAATGGAAAA
AGGATGCTGG ATGCGGGATT AGATTTTGCC AGTATTATAG CTGATAAAAA GAATTGGGCA
GAAAACTTCA TTCTTCAATG GGATGCTATA GAAACAGCCG CAAAGTCTGT AGGTTGTTTG
GATAGGCTGC ACATCTGGGC AGATGCACAA TTAAAAGGTT TTGTTGATGA AACTAAATTA
ACTGACTGGA TAGGAAAACC GACAGTTGAG CAATGGGCTA ATAATATTTA A
|
|---|
| Protein sequence | MTITGIEEII NPLQESKLNK KGLCDYVINV ATGCTHGCSF CYVPSTPVIR TNQQHLKEKG
INDPQLDWGK YLLIREDIPE KLTEVLEKKK TWKTTPSGKG VVLLSSGTDP YQNKQTAKIT
LGAVEILLKH KKRIRILTRS PLWLNHLNTL VDNNITVGMS LPYLDDELSR KIEPFAPPPS
LRYNALLKGH QRGCRLYVAI APTPPMMKLD DFQYYLEKIM KFKPEVIFWE PINARGSNGK
RMLDAGLDFA SIIADKKNWA ENFILQWDAI ETAAKSVGCL DRLHIWADAQ LKGFVDETKL
TDWIGKPTVE QWANNI
|
|---|
| |