Gene PCC7424_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5333 
Symbol 
ID7111221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5917209 
End bp5917814 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID643483539 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_002380548 
Protein GI218442219 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCC TCACACAAGC CCAACAAGAG CTATATGATT GGCTATGCGA GTATATCAGA 
ACCAGTCAAC ACGCTCCTTC TATTCGTCAG ATGATGAAGG CCATGAACCT TAGATCTCCA
GCGCCGATCC AAAGTCGTTT GGAACGGTTA CGCTCAAAAG GTTACATTGA CTGGACAGAA
GGAAAAGCTC GCACCATTCG CATTCTCCAT CAACCGGCGG TAGGAATACC CATTTATGGG
TCGATCGCAG CCGGGGGACT GGTAGAACCC TTTACCGACA TCGAAGAAAA ACTGGATCTG
ACCAGTTTCT TCCAACAACC CAATTGGTTT GCCTTGAGGG TGACGGGGGA CAGTATGATC
GAAGACCTCA TCACTGATGG GGATATGGTG ATTATGCGCC CTTTAGATCC CGATGAAAAC
CTCAAAAATG GGGAAATTGT CGCCGCTAGA GTCGGTGGTC ATGGCACGAC CTTAAAACAC
TATTATCTTG AAGGAGAAAA AGTCACCTTA CAACCTTCTA ACCCTAACTA TAGACCGATT
GAAGTCGGAC TTCATGAAGT TGAAATCCAA GGGATCTTAG TCGGTGTTTG GCGAGAAAAA
AATTAA
 
Protein sequence
MEPLTQAQQE LYDWLCEYIR TSQHAPSIRQ MMKAMNLRSP APIQSRLERL RSKGYIDWTE 
GKARTIRILH QPAVGIPIYG SIAAGGLVEP FTDIEEKLDL TSFFQQPNWF ALRVTGDSMI
EDLITDGDMV IMRPLDPDEN LKNGEIVAAR VGGHGTTLKH YYLEGEKVTL QPSNPNYRPI
EVGLHEVEIQ GILVGVWREK N