Gene PCC7424_5230 details

Gene Information

• Locus tag: PCC7424_5230
• Symbol: carB
• ID: 7109562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: -
• Start bp: 5803702
• End bp: 5806950
• Gene Length: 3249 bp
• Protein Length: 1082 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643483437
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_002380446
• Protein GI: 218442117
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 56
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCACGCC GCAACGATCT ACATAAAATC TTAATACTCG GTTCAGGTCC AATCGTCATT 
GGACAAGCGT GTGAATTTGA CTATTCAGGG ACACAAGCGT GTAAAGCTCT ACGAGAAGAA 
GGCTATGAAG TTGTTTTAAT TAATTCTAAT CCCGCTTCAA TTATGACCGA TCCGGAAATG 
GCCGATCGCA CCTACATTGA ACCCTTAACT CCGGAAATGG TAGAAAAAGT GATCGCTAAA 
GAACGTCCAG ATGCAATTTT ACCGACAATG GGGGGTCAAA CTGCTCTTAA TTTAGCTGTC 
TCTTTGGCTA AAAATGGAGC ATTAGATAGA TATAATGTAG AGTTAATCGG GGCAAAATTA 
CCGGCCATTG AAATGGCAGA AGACCGGTTA TTATTTAAAG ATGCGATGGC AAGAATTGGA 
GTGCCGGTTT GTCCTTCAGG AATTGCTAGT AATCTAGACC AAGCTAAAGC GATCGCCCTT 
GAAATTGGCT CTTATCCTCT AATTATCCGA CCGGCTTTTA CTTTGGGAGG AACGGGAGGC 
GGCATTGCTT ATAACCAAGA AGAATTTGAA GTCATGGCAC AATATGGCCT TGATTGTTCT 
CCAGTGTCAC AAATCTTAGT CGAAAAATCC CTTCTGGGTT GGAAAGAATA TGAGTTAGAA 
GTGATGCGAG ATTTGGCCGA TAATGTGGTT ATTATCTGTT CAATTGAAAA TATCGATCCG 
ATGGGAGTTC ATACAGGAGA CTCCATTACC GTTGCTCCGG CACAAACATT AACCGATAAA 
GAATATCAAC GCTTAAGAGA TTATTCTAAA GCCATTATTC GAGAAATCGG TGTAGAAACT 
GGCGGATCAA ATATTCAATT TTCGGTTAAT CCCGTAGACG GGGAAGTGAT CGTCATTGAA 
ATGAATCCGA GAGTCTCCCG GTCATCCGCT TTAGCATCAA AAGCAACCGG GTTTCCTATT 
GCTAAGTTTG CCGCTAAATT GGCCGTTGGA TATACTCTTG ATGAAATTTC TAACGACATT 
ACTAAACAAA CTCCCGCGTC TTTTGAACCG ACTATAGATT ATGTAGTCAC AAAAATCCCT 
CGTTTTGCCT TTGAAAAATT CCCCGGAGCG CAACCGATTC TCACCACTCA AATGAAATCC 
GTCGGGGAAG CAATGGCAAT CGGGCGCACC TTCCAAGAAT CTTTCCAAAA AGCCCTCCGT 
TCCCTCGAAA CTGGACGTTA TGGGTTTGGA TGTGATAAAA ATGAGACGTT ACCCTCATTA 
TCCCAACTCC GGGCGAGTTT ACGGACTCCT AACCCAGAAC GAATTTTTAG TGTCTATCAA 
GGATTTAAAC TGGGAATGAC GGTAGAAGAA ATCTTTGAAT TGACAGCGAT CGATCCTTGG 
TTTTTAGATA AAATGCAGGA ATTAGTCGAC ACAGAAAAAT TCCTCAAACA AACCCCCCTC 
AACAAGATTA CTGCTGAACA AATGCGGTTT GTGAAACAGC AAGGATTTAG CGATCGTCAA 
ATTGCTTTTG CCACCAAAAC GGGAGAAGAT GAGGTCAGAA ATTACCGCAA AGAATTAGGC 
ATTACCCCAG TCTATAAATT AGTCGATACC TGTGCGGCGG AATTTGAAGC CTATACTCCC 
TACTACTACT CGACCTATGA AGAGGGAGAA AACGAAATTA GACCCGTCGA TAAACGCAAA 
GTGATGATTT TAGGAGGTGG CCCGAACCGC ATTGGTCAGG GGATAGAATT TGATTACTGT 
TGTTGTCATG CGGCGTTTGC TCTTTCCGAT GAGGGGTTTG AAACCATTAT GGTCAATTCT 
AACCCGGAAA CGGTTTCTAC TGACTACGAT ACTAGCGATC GTCTCTATTT TGAACCCCTA 
ACCAAAGAAG ATGTTCTCAA CATTATTGAA CAGGAAAACC CCGAAGGAGT TATCATTCAA 
TTTGGCGGAC AAACTCCCCT AAAATTAGCT GTTCCTCTAC AGAAATATTT AGAGAGTCCC 
AATTGTCCCG TACAAACTAA AATTTGGGGC ACATCTCCCG ACTCCATTGA TATTGCTGAA 
GATAGAGAAC GGTTTGAAAA AATTCTCTCC CAATTAAAGA TTACTCAACC GCCTAATGGG 
ATTGCTCGCA GTTTTGATGA ATCTTTAATT ATTGCCAGAC GAATTGGGTA TCCGGTGGTG 
GTGCGTCCGT CTTATGTATT GGGGGGACGG GCAATGGAAA TCGTCTTTTC TGACCAAGAT 
TTAGAACGAT ATATGACCTA TGCGGTGCAG GTGGAACCGG ATCATCCAAT TTTAATTGAT 
AAATTCCTGG AAAATGCGAT CGAGGTGGAT GTGGATACTT TAGCCGATAC AAGCGGGAAA 
TCGATTATCG GCGGTATTAT GGAACACATC GAAGAAGCCG GGGTACACTC TGGAGACTCT 
GCTTGTTCTA TTCCCTACAG TAGTTTAACC CCTGCAGTTT TAGATACCAT TCGCACATGG 
ACATCGCAGT TAGCAAATGT GCTTAAAGTA GTCGGGTTGA TGAATATTCA ATATGCGGTG 
CAAGGGGAAC AGGTGTATAT TTTAGAAGCG AACCCTCGCG CCTCTCGGAC AGTTCCTTAT 
GTCTCTAAAG CGACGGGTGT TCCTCTAGCT AAAATTGCCT CTTTGGTGAT GTCCGGTAAA 
ACCTTAGAAT CTTTGGGTAT TACTCAAGAA TTTATTCCTA AGCACGTAGC GGTTAAAGAG 
GCGGTGTTAC CCTTTGAGAA GTTCCCCGGT GCGGATACCC TCTTAGGGCC TGAAATGCGG 
TCTACAGGGG AAGTGATGGG TATTGATACG GACTTTGGTA AAGCGTTTGC TAAGGCGGAA 
ATTGCTGCCG GAGTTCGTTT GGCCACTTCT GGAACGGTGT TTGTATCCAT GAATGACCGA 
GATAAAAAGG CAACGGTTCC GGTGGTGAAA GATTTAATTA GTCTTGGGTT TAAAATTGTC 
GCCACTTCTG GAACGCAAAA AGTTCTCGAA GAAAATGGAA TTGAAGATGT AGAAGTGGTT 
CTCAAACTTC ATGAAGGCCG TCCCCATGTT ATAGACTGGA TTAAAAATCA TTGGATTCAG 
TTTATTATTA ATACTCCCAG TGGGGAAGAA TCTCAAGCGG ATGGGCGTTC AATTCGGCGT 
ACTGCCTTAG ATTATAAGTT ACCGATTATT ACCACCATTG CCGGTGCAAA AGCTACGGTA 
GCGGCGCTGA GAACGTTACA GTCTGAACCG TTGGAGGTTA AAGCGATACA AGATTACATT 
GCTAAGTAA 

 

Protein sequence

MPRRNDLHKI LILGSGPIVI GQACEFDYSG TQACKALREE GYEVVLINSN PASIMTDPEM 
ADRTYIEPLT PEMVEKVIAK ERPDAILPTM GGQTALNLAV SLAKNGALDR YNVELIGAKL 
PAIEMAEDRL LFKDAMARIG VPVCPSGIAS NLDQAKAIAL EIGSYPLIIR PAFTLGGTGG 
GIAYNQEEFE VMAQYGLDCS PVSQILVEKS LLGWKEYELE VMRDLADNVV IICSIENIDP 
MGVHTGDSIT VAPAQTLTDK EYQRLRDYSK AIIREIGVET GGSNIQFSVN PVDGEVIVIE 
MNPRVSRSSA LASKATGFPI AKFAAKLAVG YTLDEISNDI TKQTPASFEP TIDYVVTKIP 
RFAFEKFPGA QPILTTQMKS VGEAMAIGRT FQESFQKALR SLETGRYGFG CDKNETLPSL 
SQLRASLRTP NPERIFSVYQ GFKLGMTVEE IFELTAIDPW FLDKMQELVD TEKFLKQTPL 
NKITAEQMRF VKQQGFSDRQ IAFATKTGED EVRNYRKELG ITPVYKLVDT CAAEFEAYTP 
YYYSTYEEGE NEIRPVDKRK VMILGGGPNR IGQGIEFDYC CCHAAFALSD EGFETIMVNS 
NPETVSTDYD TSDRLYFEPL TKEDVLNIIE QENPEGVIIQ FGGQTPLKLA VPLQKYLESP 
NCPVQTKIWG TSPDSIDIAE DRERFEKILS QLKITQPPNG IARSFDESLI IARRIGYPVV 
VRPSYVLGGR AMEIVFSDQD LERYMTYAVQ VEPDHPILID KFLENAIEVD VDTLADTSGK 
SIIGGIMEHI EEAGVHSGDS ACSIPYSSLT PAVLDTIRTW TSQLANVLKV VGLMNIQYAV 
QGEQVYILEA NPRASRTVPY VSKATGVPLA KIASLVMSGK TLESLGITQE FIPKHVAVKE 
AVLPFEKFPG ADTLLGPEMR STGEVMGIDT DFGKAFAKAE IAAGVRLATS GTVFVSMNDR 
DKKATVPVVK DLISLGFKIV ATSGTQKVLE ENGIEDVEVV LKLHEGRPHV IDWIKNHWIQ 
FIINTPSGEE SQADGRSIRR TALDYKLPII TTIAGAKATV AALRTLQSEP LEVKAIQDYI 
AK