| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5191 |
|---|
| Symbol | |
|---|
| ID | 7109523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 5764775 |
|---|
| End bp | 5765701 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643483399 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_002380408 |
|---|
| Protein GI | 218442079 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000000000000721787 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACT CTCGATTAAA TAACGGTTGG ATATATCGAG AACAGGTCAA CCCCTCAGAT
GCAGGGTTAA CGGTTTTAGA CTATTACAGT CAAAAATACC CTCATTCGAC CCCTTGCCAA
TGGTTTGAAA GGATTACATC AGGACAAGTT TTGCTCGATG GACATTCTTG TAATCCTCAT
ACTCGGTTGA TAACAGGGCA AAAATTAGCT TATCATCGAC CTCCTTGGGA AGAACCTTCT
GCTCCTCTGA ATTTTGATCT CCTTTACTCT GACTCAGATG TGCTAGTTGT CGCTAAACCC
GCAGGATTAC CTATTTTACC AGGGGGTGGC TTTGTCGAAC ATACGTTATT GGGGCAATTA
AAGCAGCATT ATCCGGAAGA TACTCCTTTT CCTATTCATC GCTTAGGTAG AGGCACATCC
GGGTTAGTTT TACTTGCTCG GTCTTCTTTT GCCAGAGGTT TTTTAAGTGA ACAAATGCGC
TCTCGTCAAA TCAGTAAAAT TTACCGGGCT TTAATTCCAA AAAGTGATTT AACAGATCAT
TTTACGATTA ATCAACCTAT TGGTAAAATT CCTCATCCGG TGTTAGGTTA TATCTTCGGG
GCAACTCCCA ACGGCAAGGA CGCTTTGAGT GAATGTCGTG TCTTAAAACG CACCTCAGAA
ACCACTTTAG TAGAAGTTAA AATTCTCACC GGCAGACCTC ATCAGATTCG GATTCATTTG
GCCGCTATTG GATATCCTTT GATTGGCGAT CCCCTTTATA CTATGGGCGG AATTCCTAAA
ATTCAAACCC CAATTACCCC AGAAAAATTG CCAGTTCCTG GAGATTGTGG CTATTATCTT
CATGCTTATC AATTAACGTT TAATCTTCCT CATCGTGAAT CACCCCTAAC CGTAACCTGT
CCTCCTCCTA GGGAGCTTGA GTATTAA
|
|---|
| Protein sequence | MHDSRLNNGW IYREQVNPSD AGLTVLDYYS QKYPHSTPCQ WFERITSGQV LLDGHSCNPH
TRLITGQKLA YHRPPWEEPS APLNFDLLYS DSDVLVVAKP AGLPILPGGG FVEHTLLGQL
KQHYPEDTPF PIHRLGRGTS GLVLLARSSF ARGFLSEQMR SRQISKIYRA LIPKSDLTDH
FTINQPIGKI PHPVLGYIFG ATPNGKDALS ECRVLKRTSE TTLVEVKILT GRPHQIRIHL
AAIGYPLIGD PLYTMGGIPK IQTPITPEKL PVPGDCGYYL HAYQLTFNLP HRESPLTVTC
PPPRELEY
|
|---|
| |