| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5186 |
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| Symbol | |
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| ID | 7109518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 5759642 |
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| End bp | 5761444 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643483394 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002380403 |
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| Protein GI | 218442074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0000000148025 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAACTT GGGGAATGAT CAGTTTATTG AGTTGCCTGT TCACTTTTAG TAATCCTTAT
CCGGTGCTAG GACAATTACG TCCTCTATCC ATTTCTGATC CCATCAGTTC TCAGATTAAT
CTATTTAGTC CTCCTCCTCA AGTGAGCAAT GTAGGTAATA TCTATGCCGC TTCTGTCAGA
TTAGATGGTT ACGAATTATT TAAAGTAACA GCCATTGATA GCCTAAAAAA CGATACAGAA
TCAAGTCTTT TATCTGCCTC ACAATTGGCT TTCATTAGGG CGCAATTGGT AGAAAACGAA
CTCAAAGGGA TTGTGTCTAA TCATCTCTAT GGGGGAAGAT TTAAACAAGG ATTTCAAAAA
GAGACCTTAA CCGTCACCGT GAGTCAACGG AATGGGGCAA CGGTTATTAT TGCTTATGAT
GATGATAAAT TAAGAGAGCG TCAAATTGTC ACCGTTACTG AACAAGACGC TCAATTTTAC
GGCTATTCTG TCCAAAATTG GGCGATCAGA TTAGCCGATA TTATTAAAAT GGCTCTCATT
CGCTCCCAAT TAGAACGAAG TTTTCCCTAT TTTATTAATA AATTATTGTT AAGTTTAGTG
ATTATTGCTG TAGCGATCGC TTTAAGTTGG GTTATCTTAT CTTGGCAAAA GAAACTGAGG
GAAAAACGAC TCGCTTTATT AGCTGAAGAA CCGATTAATG AATTAGTGCT TTCTCCCTCA
GAACTATCTT CTATAAAAGA AGATTTATCG ATGGCGGCTC AACAATCTAA ATTTTTTAAA
GTGCGAGAAA AACAGCAACA ATTTTCCCGT AAATTAGAAT TAATTCGCTT AAAAAGACGA
TTGTTTCAGT CAGCACAAAT TATTATTTTG TTGGTGAGTT TAATCTCGAT TATTGAATTA
TTTCCCTGGA CGAGATGGAT TTCTTCGGAA TTTTTACAAA AACCGTTTAT GGTATTAATG
GTAGTTTTGG GTAATGGGGT AATTATTCGT CTCAGTTCAA TTTTTATCGA TCGTTATACC
CAAACTTTAA TCGAAGAAGC CTCTATTTGT CCTCTGGTTT GTTCGGATGC AGGAACGTCT
CAAAGACGAG CTTCCCGTTT GAGTACCATA GGAGAAATCA GCAAACATTT TATTTTTTGG
GCTTTTACCG GAATTAGTTT AATTGTTTCT TTAGATATTT TAGGATTACC GGTAAAGGCA
TTATTAACCG GAGCAGGAGT ATTAGGAATT GCTATTTCTT TAGTCGCCCA AAGTTTTATT
AAAGATTTAA TTAATGGGAT TCAAATTTTA CGTCAAGACC GGTATGTAGT CGGAGATTTT
ATTCAAGTAG AAGATACTTG GGGATTAGTA GAAGGATTTA GTTTAACTAT CACTCAAATT
CGGGGAACTC AAGGACGTTT AACCACTGTT CCCAATGGAG ATATTAGAGT TGTTCATAAT
TTAACAAAAG AATGGGCAAG AGTTGATATT TATATTAAAG TTTCTCATGA TACGGATATT
GACTTAGCCA TGAAAGTGAT GCAACAAACC GCTCAAAAAA TGCAGCAAGA TCCAGAATGG
GGATGTCTTA TTATAGAACC GACTGTTGTA ATGGGAGTTC ATAATTTAGA TCATACCGGA
GTTGAAATTC AATATTGGAT GAAAACGAAA CCGACACAAC AATGGTCAGT CGGTCGAGAA
TATCGTCGTC GTCTTAAACT GGCTTTTGAA GAAAAAGAAA TTCATTTAGG TATTCCTCAA
CAATCGGTTG TTATTCCTAA TTCTTCTCCT TTAATTGAAA TTAAAGATAA TGGAGTTAAT
TAA
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| Protein sequence | MITWGMISLL SCLFTFSNPY PVLGQLRPLS ISDPISSQIN LFSPPPQVSN VGNIYAASVR
LDGYELFKVT AIDSLKNDTE SSLLSASQLA FIRAQLVENE LKGIVSNHLY GGRFKQGFQK
ETLTVTVSQR NGATVIIAYD DDKLRERQIV TVTEQDAQFY GYSVQNWAIR LADIIKMALI
RSQLERSFPY FINKLLLSLV IIAVAIALSW VILSWQKKLR EKRLALLAEE PINELVLSPS
ELSSIKEDLS MAAQQSKFFK VREKQQQFSR KLELIRLKRR LFQSAQIIIL LVSLISIIEL
FPWTRWISSE FLQKPFMVLM VVLGNGVIIR LSSIFIDRYT QTLIEEASIC PLVCSDAGTS
QRRASRLSTI GEISKHFIFW AFTGISLIVS LDILGLPVKA LLTGAGVLGI AISLVAQSFI
KDLINGIQIL RQDRYVVGDF IQVEDTWGLV EGFSLTITQI RGTQGRLTTV PNGDIRVVHN
LTKEWARVDI YIKVSHDTDI DLAMKVMQQT AQKMQQDPEW GCLIIEPTVV MGVHNLDHTG
VEIQYWMKTK PTQQWSVGRE YRRRLKLAFE EKEIHLGIPQ QSVVIPNSSP LIEIKDNGVN
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