Gene PCC7424_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_5178 
Symbol 
ID7109510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp5750025 
End bp5750594 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content36% 
IMG OID643483387 
Productprotein of unknown function DUF820 
Protein accessionYP_002380396 
Protein GI218442067 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0000263647 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTCTAA CACCATTACA ATCCATCACT TTAGAAGACT TTCTTAAACT TCCTGAAACT 
GATCCAGCCA GGGAATATAT TAATGGGGAA ATTATTCAAA AACCAATGCC AAAAGGAAGA
CATAGCCGTT TACAGGGAAA ATTATGTAGT GTCATTAATG AAATCACGGA ATCTGCTCAA
ATTGCTTATG CTTTTCCTGA GTTAAGATGT ACTTTTGGGG GACGTTCCAT CGTTCCAGAT
GTGGGGGTAT TTCGATGGGA AAATATTCCT TTTACCCAAG CCGGAGAAGT CCCTGATGAT
TTTTTTAGAC CTCCAGACTG GACAATTGAG ATTTTATCTC CAGAACAAAA ACCCAACAAA
GAGATTGGCA ATATTTTGTC TTGTTTGTCT TATGGATCTC AACTGGGATG GTTTATTGAT
CCTGATGATC TCAGTATATT AGTTTTTTTC CCTTCTCAAC AACCCCAATT ATTACAAGGA
AATGATCTTT TACCTATTTT AGAAATAATT CCTTTAGAGT TAACCGTCAG TCAAGTTTTT
AGCTGGTTGA AAATGCGTTC TAATTCCTAA
 
Protein sequence
MTLTPLQSIT LEDFLKLPET DPAREYINGE IIQKPMPKGR HSRLQGKLCS VINEITESAQ 
IAYAFPELRC TFGGRSIVPD VGVFRWENIP FTQAGEVPDD FFRPPDWTIE ILSPEQKPNK
EIGNILSCLS YGSQLGWFID PDDLSILVFF PSQQPQLLQG NDLLPILEII PLELTVSQVF
SWLKMRSNS