| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_5172 |
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| Symbol | |
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| ID | 7109504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 5741701 |
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| End bp | 5743344 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643483381 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002380390 |
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| Protein GI | 218442061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00242224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTTGGA TTTGTGACGG AGTGCCAAAA GACGGGAAAG ATTATCCCCA AGCTATACCC
GGCGGTCACA CCCCTTATGA AAATCACGGC CCAGATTGTA ACATTTGTGG GTTGCCTCAA
GAAGCGATGA GCGGAGGAAA AGGAGGAGGA TTTGGCGGCG GCGGTGGGAA AACCCAGACA
ACAGTCGTCA GTGCCCCTAC TACGATCGCC AGAAAAAAAC AATCTCAATG GCTGATTCCA
GCGATCGGAG TCGCGTCTGT CCTCATTCTC GTGGGGGGAG GATTTGGACT CTACAAAGTC
TTGTTTTCTC AATCAGAGAA TAACGAACCT GATCCCGTTC CTACCATAAC AGTAACCCCC
GGTACAGCCG GAGGATTGAT TAGTTCTAAT GCCCAAAATG GGCAATACAT CAGTCAAGGG
GAAAAAATTC TCCTCGATGC AACTCCTGAT AAACAAGACG GCGCAACAGC CTTTGGTGGG
CAAGATTGGG ATGGGGCAAT TAGCGCCTAT CAACAAGCCG CCAACAGCGA TCCTAACGAT
CCAGAAGCGA AAATTTACCT CAATAATGCT CAAGCGCAAA AAAGCGGCAA TCCTTTAACA
ATAGCCGTAG TTGTTCCGAT TAAATCTGAC CCCAACTCAG CCAAAGAAGT CCTTAGAGGA
GTGGCCAAAG CTCAAGAAGA GTATAATCAA AATCCTCAAG GCAGTCTGTT ACAAGTCGTG
ATCGCAGATG ATCCCGGCGG GTTAGACTCC AAAGCGATCG CCGAAGATTT AGTCAATGCG
TCGGAGGTTG TGGGAGTGAT CGGTCATGGG ATTGATCCTT TTAGTGAGCA AGCGATCAAA
GAATATGAAA CCGCCGAATT AGCGATTCTT TCCCCTCGAA CCACCAGCGT TACAGATGGG
AGTCAACCTA CCTTAAAAAC CATTGGGATG GATCAAAAAA CCGATGAGTT ATTAGGCAGT
TATCTCCAAG GGGTAGGAAA AACCTTGACC GAATACGCCG CTAACACTAA TCCCTCTCCT
AAATCTGTAA TCATTTACAA TTCCGAGAGT CCCTACAGTC AACGACTCAA AGACGAGATT
GTCAACGCTT TACCCCAAGT TCAGGGACAA ATGCTCAAGG AATTTGACGT TAAATCTGCC
ATCGATCCCA CAACCGTCAT CAGTGAAGCG ACCGGAGGAG GGGCAAAAGT CGCCTTTATC
GCTCTCAATA AAGGAAAAGT GGATGATGCG ATCGCCCTGG CCCAAGCCAA TGCCGATGCT
GGTTTTCCCC TGCTGTTATT GGGAGGAGAT GAACTCTACA GTCCTGAGAT TTTGAGCGGA
GGAGGAGATG CGGTTAAAGG AATTGTCTTA GCCGTTCCCT GGACGTTTCA ACCTAACGAT
CCTTTTGCCA GAGATGCGAT TAAAAGTTGG AAAGGACGAG TCAGTTGGCG CACTGCAACC
GCCTATGATG CCACCCAAGT GTTAGCCCAA GCGGCGAGTG AAAATTCTGA TCGCTCTGGA
GTGTCTAGCG CCCTAGCTCA AGGTGTCCCT TTAAACTCTG CCAATACTAA TTTTAGTATC
TTTGATGAAG TCCCCTTAGT AGAAGCCAAA CTCGGTACAG GAGGGCCTCC TGGATCGAGT
TATGTGTTTT CTCCTGTTCA ATAA
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| Protein sequence | MSWICDGVPK DGKDYPQAIP GGHTPYENHG PDCNICGLPQ EAMSGGKGGG FGGGGGKTQT
TVVSAPTTIA RKKQSQWLIP AIGVASVLIL VGGGFGLYKV LFSQSENNEP DPVPTITVTP
GTAGGLISSN AQNGQYISQG EKILLDATPD KQDGATAFGG QDWDGAISAY QQAANSDPND
PEAKIYLNNA QAQKSGNPLT IAVVVPIKSD PNSAKEVLRG VAKAQEEYNQ NPQGSLLQVV
IADDPGGLDS KAIAEDLVNA SEVVGVIGHG IDPFSEQAIK EYETAELAIL SPRTTSVTDG
SQPTLKTIGM DQKTDELLGS YLQGVGKTLT EYAANTNPSP KSVIIYNSES PYSQRLKDEI
VNALPQVQGQ MLKEFDVKSA IDPTTVISEA TGGGAKVAFI ALNKGKVDDA IALAQANADA
GFPLLLLGGD ELYSPEILSG GGDAVKGIVL AVPWTFQPND PFARDAIKSW KGRVSWRTAT
AYDATQVLAQ AASENSDRSG VSSALAQGVP LNSANTNFSI FDEVPLVEAK LGTGGPPGSS
YVFSPVQ
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