Gene PCC7424_4610 details

Gene Information

• Locus tag: PCC7424_4610
• ID: 7107627
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 5109125
• End bp: 5111032
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643482827
• Product: ribonuclease II
• Protein accession: YP_002379840
• Protein GI: 218441511
• COG category: [K] Transcription
• COG ID: [COG0557] Exoribonuclease R
• TIGRFAM ID: [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.715919
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAGAGAAT TTAGTTCCCA AGTTATTCAA GAGCTAGAAA CCTTAAAAAT TCCAGATTAC 
AGTAATCGAG AACCGGTCTT AGGATTTACC ATAGATGCTG AAACTTCCCT AGATTTAGAT 
GATGCCATTT GGATTGAACC CACCCGACGG GGAGCAATCG TCATGGTACA TATCACTGAT 
GTTACCGCTA TTATTCCCCA AGGATCTGCT TTAGAAGCCG CCGCCATTGA ACGAGTGGAA 
ACCCATTATC ACACTCGTAC CGTTGATCCT ATGTTACCGG CAGATTTGGC TAATAATAAA 
CTCAGTTTGT TAGAAGGACA GCTTAGACCT ACCGTTACCA TCCAAATTAC TCTCAATCAT 
AATGCGGAAA TAGAAGACAC AAGGGTCTCC CTAACTCAAC TCACTAGCCT GAAAAAGTTT 
TCTTATGTCG AAGCTGAGTC GGTGATGAAT CAACCCAGTG ACCCATTTTT TTCGATGATA 
CGCTATTGTG ATATCTGGTC TCAAAAACTC TATTGGCGAC GAACGACGAT GGGTGCTATT 
GGAGGAACGT CTATCTCTGG TCTTTTTTTA GATGAGGAAG GAAAACCCGA TCAACTTAGA 
CAGTATCGTT CCCAACAGAT TATTCAAGAA TTTATGATCC TGGCTAATAC AGCGATCGCA 
CAATTAGCGG CACAACACCA ACTCCCTATC CTTTACCGAA ATCATACGGC CTCTGCCATA 
GCACCAGAGA AAAAGATTAT GATTGAAACT TTAAGCGCTT TGGGAATGCC GGATTTAATT 
CGATCGCAAT TGGCAACTTG GTTAAATAAA GCCACCTATA ATCCCTATTT AGTGGGACAT 
TTTGCCTTAT CCATCGACGC TTATTGTCAT TTTACTTCTC CGATTAGACG GGTAGCAGAT 
TTGCTCAACC ATCGGATGAT TAAAGCCGTA TTTATTGAAC ATCAAGCTAT TCCCTATACG 
GTTGAAAAAT TAACTAAAAT CGCTGATGCC ATCAATCAAT ATAAAGAAGA ATATCGGCAA 
AAAAATAATG AATTTTTTGA AGCTGAGAGA GCCAAACGAG CGCAAGCCAT TTTAAAAATC 
CCCTCCCAGC TACAACATTT AGGGGAAAAA GAATTTTCTC AAATTCTCAA AAATGCGGTG 
GGCACTGAGA AAATAGTGAC CGTTATCCCT GAAATTATTA ACCGCCTACA GAATAAATCT 
ATTCAACCGT TAGATTTATA TTATTTATCT AAATGTGATT ATTCTCAACC CGAAACCCAA 
AATCTAGCGG AGGCTTTAAT TGCTTATTAT CAACAAGCAG CAACCAGAGC CACTCAAATT 
TTACAGATAA AATCCCAACG AGATAGCACT GTCGTCGACT ATATTTATCA ACAGAATGCT 
AGTCATCATT TTGCCTGTTG GTGTATAGTT GATAATCAAA CGTCATTGTA TCCCGCTAAA 
GGACAAAATA AACAGGAATC AAAACATTAT GCCTCAATTC TCTGGTGGGA ACAATTTTTT 
AAACAGGCTT TAGTCGCTCC TAACGATCGC GTTTTAGAAT GGGAACAGAA CCCTGAAGAC 
CTATCTGAGG AGGAACAAGA CTGTAATGAT GTTAACCCAA TAGAAACAGA TGAGTTTAAT 
GATTCAGTTT TATCCTCTCA ACCCGATGAG CAAACAGAAT TACTAACTCA AGTGGATAAC 
CCGATAGGTT ATCTTAACGA CAAATTGCCC ATCATGGGCA TCGATAAACC TCAATACGAG 
TATCGTAGTC TGCCGCAAGG GTGGGAATGC ACTTGTAAAG TTATCTATCA AGAAGAAACC 
ATTACCGGAG TTCAAATCGC GTCATCGAAG AAAGAGGCAA AACATTCTGC CGCCTTAATA 
ACTTTGAACA AGCTCGAGCA AAAACAAGTT TTTTCTTTCG AGTCTTAA 

 

Protein sequence

MREFSSQVIQ ELETLKIPDY SNREPVLGFT IDAETSLDLD DAIWIEPTRR GAIVMVHITD 
VTAIIPQGSA LEAAAIERVE THYHTRTVDP MLPADLANNK LSLLEGQLRP TVTIQITLNH 
NAEIEDTRVS LTQLTSLKKF SYVEAESVMN QPSDPFFSMI RYCDIWSQKL YWRRTTMGAI 
GGTSISGLFL DEEGKPDQLR QYRSQQIIQE FMILANTAIA QLAAQHQLPI LYRNHTASAI 
APEKKIMIET LSALGMPDLI RSQLATWLNK ATYNPYLVGH FALSIDAYCH FTSPIRRVAD 
LLNHRMIKAV FIEHQAIPYT VEKLTKIADA INQYKEEYRQ KNNEFFEAER AKRAQAILKI 
PSQLQHLGEK EFSQILKNAV GTEKIVTVIP EIINRLQNKS IQPLDLYYLS KCDYSQPETQ 
NLAEALIAYY QQAATRATQI LQIKSQRDST VVDYIYQQNA SHHFACWCIV DNQTSLYPAK 
GQNKQESKHY ASILWWEQFF KQALVAPNDR VLEWEQNPED LSEEEQDCND VNPIETDEFN 
DSVLSSQPDE QTELLTQVDN PIGYLNDKLP IMGIDKPQYE YRSLPQGWEC TCKVIYQEET 
ITGVQIASSK KEAKHSAALI TLNKLEQKQV FSFES