Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_3521 |
Symbol | |
ID | 7107144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 3916043 |
End bp | 3916780 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643481760 |
Product | TPR domain protein |
Protein accession | YP_002378781 |
Protein GI | 218440452 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC CAACAAAAAG AAAACTTATT CAACGAATTT TAATCATCGT TTCAGGCTCG GCTTTTTTGG GGTTAATGGT CATCCCCCTT ATGGAGGTTT TTAAACAAGA TAGTTCTCCC ACTCAACAAG CCTCAACCTC TTCCGCACAA GGACAACAAT TACAACAAAT CGCTCAAGGG TACGAGGCCG TTTTAAAACG AGAACCTAAT AATGTTAGTG CCCTTCAAGG TTTAGCAGAA GCTAGGCTCA ATTTACAAGA TTTTTCAGGG GCGGTTGAAC CCGTTAAAAA ACTTCATGCT TTAGATCCGG CTAATCTCCA ATATATAGGA GTTTTAACCC AACTTTATCA AAGAAATAAT GATGTAACTG GGGCACAGGA ATTAACTCCA AAAGTTGAAA AATTAGCCCA ATCTGACCCC AATAACCCTC AATACATCAT GATTTTGACT CAACTTTATC GCCAAACTAA TAATACATCT GAGTCAACTA AATTAGAAAA TCAAGTCGAA AAGTTGGTAC AAGCTGACCC CAATAATCCT CAATATCTCC AAATTTTAGC TCAACTTCGT CTTCAAGCTA ATAATTTACC AGGGGCACTA GAAACGATGA AAAAACTTCA ACAGTCTTAC CCTGAAGATG AACAATTAAA AGTGGCTATT CAAAAAATAG AAGAAGCGAT CAAGCAACAA GATCAAGCCC TTCCTATTCC TCTTCCTTCC CCTTTAAATA ATGAATAA
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Protein sequence | MAEPTKRKLI QRILIIVSGS AFLGLMVIPL MEVFKQDSSP TQQASTSSAQ GQQLQQIAQG YEAVLKREPN NVSALQGLAE ARLNLQDFSG AVEPVKKLHA LDPANLQYIG VLTQLYQRNN DVTGAQELTP KVEKLAQSDP NNPQYIMILT QLYRQTNNTS ESTKLENQVE KLVQADPNNP QYLQILAQLR LQANNLPGAL ETMKKLQQSY PEDEQLKVAI QKIEEAIKQQ DQALPIPLPS PLNNE
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