| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_2181 |
|---|
| Symbol | |
|---|
| ID | 7108911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 2428549 |
|---|
| End bp | 2429718 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643480434 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002377471 |
|---|
| Protein GI | 218439142 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0011039 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACT CTGACATTAT TGTTATTGGC GGTGGAATTA CCGGTTCTGC CTTAAGCTAT
GAATTAGCTA AAAAAGGATT AAAGGTTCTA CTCCTAGAAA AAGATGCGAT CGCTGATAAT
GCAACACAGT ATAGTTATGG TGGGTTAGCT TATTGGTCAG GAACAACAGA ATTAACCCGT
CAACTCTGTC AAGAAGGCAT TAATATTCAC CGCAATTTAT CAGCAGAATT AGACGCAGAT
ACAGAGTTTC GTGAAATCAG TTTAATTTTA ACCATCGATG CCGGCGATGA TCCTAATTTA
GTCTTTCAAA ATTATGGGCG CTTTGCTATT CCTCCTCAAT TATTAACGGT TGAACAAGGG
TGTGAAGTTG AACCTCTTCT TAATCCTAAA GCCATTTCCG GGGTGTTAAA ACTGCCTCAT
GGTCATATCA ATACTCAAAA AACCAGTAAA GCTTATCAAC AAGGATTTTG TCGTTTAGGA
GGGGAAATCA AAATAGAACA AGTGACGAAA CTTTTACGAG AAAAAAATCG GATTATAGGC
GTTGAAACCC CACAAGGAAG TTATTTTGCT GATAAAGTTA TTGTCGCTGC CGGAGGGTTA
AGTCGTTTTC TATTAGCAGA GGCAGGGATT AACGTTAGAC TCTATTTTAC CCATGCTCAA
CTCATTAAAA CTCCCCCAAT CAAAGACATA AAACTTCGGA CTTTGATCAT GCCCGCCGTG
CAAAAACGCT TAATTATGGA GTCTAATTGT ACCCAAACCG AAAGAGAGGA CTTATGGACT
AATCCCAGTT CAGAGTTAAT GGAGGGAATT ATAGAACCTG GAGCAATTCA ATTTCTAGAT
CACAGTTTTG TTTTAGGGCA AATTAGTCAA GTCCGAACCG ATTATCGTGC TGCAATTGAT
CCCGTTACCA GTGAAGCCGA AATAAGGACA GAGATAGGCA GACTACTACC TCTATTACAC
AATATACCAG GAACATGGCA CAGTTGTCTA GTGGCTTTTG CCAATAATTC TCGTCCTTTG
GTGGGAGAAA TTAACAATTT TTCTGGGATT TATTTGTTTT CAGGATTTAC CAGCCCTTTA
GTTTTTGCTC CTCCATTAGC CAGACATTTT GCCAGTTGGA TAGGAGGAGA AAATGATAAA
ATTATCCGTC AATTATCCCC GGTAAGTTAA
|
|---|
| Protein sequence | MTNSDIIVIG GGITGSALSY ELAKKGLKVL LLEKDAIADN ATQYSYGGLA YWSGTTELTR
QLCQEGINIH RNLSAELDAD TEFREISLIL TIDAGDDPNL VFQNYGRFAI PPQLLTVEQG
CEVEPLLNPK AISGVLKLPH GHINTQKTSK AYQQGFCRLG GEIKIEQVTK LLREKNRIIG
VETPQGSYFA DKVIVAAGGL SRFLLAEAGI NVRLYFTHAQ LIKTPPIKDI KLRTLIMPAV
QKRLIMESNC TQTEREDLWT NPSSELMEGI IEPGAIQFLD HSFVLGQISQ VRTDYRAAID
PVTSEAEIRT EIGRLLPLLH NIPGTWHSCL VAFANNSRPL VGEINNFSGI YLFSGFTSPL
VFAPPLARHF ASWIGGENDK IIRQLSPVS
|
|---|
| |