| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1732 |
|---|
| Symbol | |
|---|
| ID | 7110390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1919061 |
|---|
| End bp | 1920986 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643479994 |
|---|
| Product | Rhs element Vgr protein |
|---|
| Protein accession | YP_002377035 |
|---|
| Protein GI | 218438706 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.00520263 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC TTAAATATTT AGCCCAACCG CTTTTAAAAA TTGATGGTCA AGACGCAGAA
AAAAAATTAT TAGAAGATAT TGTAGAAATT ATTGTAGAAC AAAGTATTTC TGAGCCTGCA
CAATTTAAAA TTACTTTTAA TAATGATTAT TTTCCCGGTC GTACTGTTGA CAAACCTTGG
CAAAGAGAAG CTTTATTTAC CATCGGATCA GCCATAGAAA TCGGATTTAT TAATGTCACT
ACAGAAGATG AAAACTTTAA TACAGAACAA AAAGAGATGA TAATTAAAGG AGAAATAACG
CAAATAGAAG CCCATTTTAA TCCTCAAGCT CAAGCCCCTA TTACTATTAT TGGGCATGAT
ATTTCTCATC GTCTTTATCG AGGAAAATAT AGTCGGTCTT TCCAAAATAT GAGTGATAGC
GATATTGTCA AAAAAATTAT TGGAGAAGAA GGGATTCAAG CCGGAACAAT TGACGAAACA
GGCGGTCCTT ATGGTTATGG AGATATTAAT AATCAAAATG GCTATCTTTT CCAAGATAGT
CAAACCAATA TAGATTTTTT AAGAAATTTA GCCGAAAGAA ATGGTTTTGA ACTGTTTGTC
AAAGAGGGTA AACTCCATTT TCGTAAATCT AAAGCTGATG AAACTTTGAC CCTTAAATGG
TTAAAAGACA TACAAGAATT TAAAGTTAAA GTGAGTAGTT CCCAACAGGT AGCCGGGGTA
AAAGTAAGCG CTTGGGATTA TGAAAATAAA AAAGTCTTAA TTTCCGAAAA AAATCAACCT
TCTTCTCAAG TTTTAACTAA AACTGAACAT GGAGAAGGAA AAAAGACCAG TAAGGTTTTT
CAGGAAAAAC CAAATAATCC TACAACAAAT GTCGTTAATC AAGCGATTTA TAATCAAACT
CAAGGGGATA AACTCGCACA AGGATTGGTG GATGAGATTT CCAGAGAATT TATTACCGCA
GAATCAAAAA CCGCAGGAAA CCCTACTCTA TGTCCGGGTA AAGTCGTAAA ATTAACGGAA
ATGGGTAAAT ACAGTGGTCA ATATTATGTT ACCCAAACCC GTCACACCTA CCAAAAAGGG
AATTATCTAA CAGAATTTTC CGTTAAAGGA ATTCATGGGA AAGAAAATAG TACAATTAAT
CAATCATCAG AAAATGGGTC TAATGGTCAT AGCGTTTTAG TGGGAATTGT CTCAAATAAT
AAAGATCCTA AAGGATGGGG TAGAGTTAGA GTTAAATTTC CCACTCTAAC AGAAGACCAT
GAAAGTTATT GGGCCAGAGT AGTGGGAATT GGCGCGGGAA ATAATCGCGG TTTTGACTGT
TTACCAGAAA TTAATGATGA GGTATTAGTT GTATTTGAAA ATGGGGATAT TCATCGTCCT
TATGTTGTTG GTGGAGTGTG GAATGGAAAA GATAAACCGC CGGAAAAAAT AGATAATACT
ATAGATGATG GAAAAGTAAG GCTAAGAACT TTTAAAACCA GAACGGGGCA CACTTTACAA
TTTGTTGAAG AAGATAAAAG CGGCGTAAAA AAAGGTATTT ATTTGGATAG TGTTTATGGT
CATCAGGTAC ATCTTAAAGA TACGGAGAAA AATATTCAAT TAAAAACTAA AAATGGCCAT
TTAGTCAATT TAGCTGATGA GCAAAAACAA ATCGAAATAA AAACCCAAAA TGGTCATATT
GTTAATTTGA ACGATCAGAA TAATCAAATT TCTCTTAAAA CTTCACAAGG TGCAAAGGCC
ACAATTACCA TGACAGGAAC AACAGGAGAT ATTACCATCA AAAGTACCTT AGGTAAAATT
GCAATCGTTG GACAAACAGA GGTTTCTGTA AAAGCGTTGA ATACCAAAAT TAATGCCACC
GGACAAGTGG ACGTAAGTGC CAGTGGAATT GTTAATATTA AAGGGGCAAT GGTTAAGATT
AATTAA
|
|---|
| Protein sequence | MSNLKYLAQP LLKIDGQDAE KKLLEDIVEI IVEQSISEPA QFKITFNNDY FPGRTVDKPW
QREALFTIGS AIEIGFINVT TEDENFNTEQ KEMIIKGEIT QIEAHFNPQA QAPITIIGHD
ISHRLYRGKY SRSFQNMSDS DIVKKIIGEE GIQAGTIDET GGPYGYGDIN NQNGYLFQDS
QTNIDFLRNL AERNGFELFV KEGKLHFRKS KADETLTLKW LKDIQEFKVK VSSSQQVAGV
KVSAWDYENK KVLISEKNQP SSQVLTKTEH GEGKKTSKVF QEKPNNPTTN VVNQAIYNQT
QGDKLAQGLV DEISREFITA ESKTAGNPTL CPGKVVKLTE MGKYSGQYYV TQTRHTYQKG
NYLTEFSVKG IHGKENSTIN QSSENGSNGH SVLVGIVSNN KDPKGWGRVR VKFPTLTEDH
ESYWARVVGI GAGNNRGFDC LPEINDEVLV VFENGDIHRP YVVGGVWNGK DKPPEKIDNT
IDDGKVRLRT FKTRTGHTLQ FVEEDKSGVK KGIYLDSVYG HQVHLKDTEK NIQLKTKNGH
LVNLADEQKQ IEIKTQNGHI VNLNDQNNQI SLKTSQGAKA TITMTGTTGD ITIKSTLGKI
AIVGQTEVSV KALNTKINAT GQVDVSASGI VNIKGAMVKI N
|
|---|
| |