Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1706 |
Symbol | |
ID | 7108587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 1878667 |
End bp | 1879755 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643479968 |
Product | photosystem q(b) protein |
Protein accession | YP_002377009 |
Protein GI | 218438680 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000000313247 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAACGA CACTAGACAG ACTACAAGAG TCTTCCTTGT GGTCACGGTT TTGTAACTGG ATTACAAGCA TTGAAAATCG GCTTTATATT GGGTGGTTTG GAGTATTAAT GATTCCTACC GCATTAGTCG CTACCATTGT CTTTATTTTG GCAATGGTTG CTGCTCCTCC AGTGGATGTA GACGGAATTC GAGAACCGGT AAGTGGTTCA CTTTTGTATG GCAATAATAT TATCAGCGCC ACTGTTGTCC CAACTTCTGC GGCGGTGGGT TTGCATCTGT ATCCCATTTG GGAAGCCACC ACAATGGACG AATGGCTTTA TAATGGCGGC CCTTACGAAA TGATTGTGCT ACACTTCCTA ATTGCCATCT ATGCTTATAT GGGTCGGCAA TGGGAGTTAA GCTATCGTTT AGGGATGCGT CCTTGGATTC CGGTGGCTTT CTCTGCACCG GTAGCGGCGG CCACTTCTGT CCTCTTAATT TATCCCATAG GACAAGGAAG TTTTTCCGAT GGGTTAATGC TAGGAATCTC TGGAACGTTC AACTTTATGA TCGTCTTCAC AGCAGAACAC AATATTCTCA TGCACCCATT TCATATGCTC GGTGTAGCGG GAGTATTTGG CGGCGCATTA TTTGCAGCGA TGCACGGTTC TTTAGTCACT TCTAGCTTAA TTCGGGAAAC CACCGAAACC GAATCGGCAA ACATCGGCTA TAAATTCGGA CAAGAAGAAG AAACCTATAA TATTGTCGCG GCTCATGGCT ACTTTGGACG GCTCATTTTC CAGTATGCCA GTTTTAATAA CTCTCGTTCT CTACACTTCT TTTTAGCAGC CTGGCCAGTG ATTGGGATTT GGTTTGCAGC GATGGGAATT AGTACGATGG CGTTTAATCT CAACGGATTC AATTTCAACA ATTCTATCTT AGATAGTCAA GGACGACCGA TCGCCACTTG GGCAGATGTC CTCAATCGAG CTAACATCGG TATTGAAGTT ATGCACGAAC GCAACGCTCA TAACTTCCCG CTCGATTTAG CGTCTAACCC CTCAACTCCT ATTGCTTTGA TGAGTAGTTC TAATTCGATA CAAAGCTAA
|
Protein sequence | MTTTLDRLQE SSLWSRFCNW ITSIENRLYI GWFGVLMIPT ALVATIVFIL AMVAAPPVDV DGIREPVSGS LLYGNNIISA TVVPTSAAVG LHLYPIWEAT TMDEWLYNGG PYEMIVLHFL IAIYAYMGRQ WELSYRLGMR PWIPVAFSAP VAAATSVLLI YPIGQGSFSD GLMLGISGTF NFMIVFTAEH NILMHPFHML GVAGVFGGAL FAAMHGSLVT SSLIRETTET ESANIGYKFG QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV IGIWFAAMGI STMAFNLNGF NFNNSILDSQ GRPIATWADV LNRANIGIEV MHERNAHNFP LDLASNPSTP IALMSSSNSI QS
|
| |