Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1654 |
Symbol | |
ID | 7108535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1829948 |
End bp | 1830631 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643479919 |
Product | glycoside hydrolase family 24 |
Protein accession | YP_002376960 |
Protein GI | 218438631 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4678] Muramidase (phage lambda lysozyme) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTAGAT CAGCCCGTTC TCGGACTCGC AAAAAGATCA ATCCTTTAAA ACTTCTTCGT TTAGTTAGTC TCAGTGTTAT TGCAATCTTA TTGTTGAATG AATTTAGGGA GCAAATCCAA CGGCGATCGC CTCTTGTCCC TTTTTTTAAC GGGTACGAAC CTCAACCCCT AGTCATGACT GGGGGTGATC CTTATATTCG CGCCTTAATG CGAACGATTA CCGCCAGTGA ATCTAATGTA GAGCGCCCCT ATAATGTGCT TTATGGGGGT AAATATGTGT CAGATTTAAG TAAGCATCCT CAGCAGTGTG TGCCTATTGT TACGGGGCCG AATGTAGGTA ACTGTACCAC AGCAGCCGGG CGTTATCAGT TTTTAAATAC GACTTGGTAC GAAAAAGCGG AGAAATATCA TCCCAGTCCT TCTGGGTTGT TGTGGTGGAA GTCTTATAGT TTTGAACCCG AATATCAAGA CCGGGTTATT TATGCGTGGT TAAAAGATCC TCAAGCTTGG GGGGTGAATA TTTCTCAATT ACTCAAAGAG GGAAAAGTTG AAGAAGTTTT ACGGTTATTA TCGGGAACTT GGACGAGTTT AGGGTACGGG ATAGAAACTA ATTCGATGAG TCCTCATTTA CCTAAAATAT ACGAGAAAAT GTTGCGACAA GAATTAGGTC ATCACATCAG CTAA
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Protein sequence | MSRSARSRTR KKINPLKLLR LVSLSVIAIL LLNEFREQIQ RRSPLVPFFN GYEPQPLVMT GGDPYIRALM RTITASESNV ERPYNVLYGG KYVSDLSKHP QQCVPIVTGP NVGNCTTAAG RYQFLNTTWY EKAEKYHPSP SGLLWWKSYS FEPEYQDRVI YAWLKDPQAW GVNISQLLKE GKVEEVLRLL SGTWTSLGYG IETNSMSPHL PKIYEKMLRQ ELGHHIS
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