Gene PCC7424_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1618 
Symbol 
ID7109618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp1785804 
End bp1786457 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID643479884 
ProductTPR repeat-containing protein 
Protein accessionYP_002376925 
Protein GI218438596 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00366972 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTTT GGCAAAAAAA GTTTAATCTA TTTTTACCCG CATTGTTAGC TTTATCCATA 
ACCGCAATCC CCCAAATGGG AAATGCTCAA GACTCTGCTC CCAGTTTAGA AGAACTGATT 
CAACTGGGAA ATCAAGCCGC CAAAAGCAAA AATTATGCTC AAGCAGAACG GCTGTTTTAT 
AATGCGGTGA AACTTTATCC CAATTATCCC GCCGCCTATT ACAATTTAGC TAAAGCACTC 
TATGACCAAG GAAAATTAGA AGAGGCAGAA ACTAACTATA GACGAGCTAT CTTACTTAAT 
CCTGAATATG CAGAAGCTTA TAATAATTTA GGCAGTGTTT TATCGGATCA AGGAAAATTA 
GAAGAAGCAA TTATTAACTT TGAAAGAGCG ATTCACTTTA ATCCTCAATA CTCTTTAGCT 
TATAATAATT TAGGAACGGC ACTCCACGAA CAAGGACATC TAGAAGAAGC TCAGATGCAA 
TATCAAACGG CGATCGAGCT TGACGATACT AATGCCCTGG CTTATTATAA TCTGGGTTTA 
GTTTTGAGAG ACCAAGGAAA AACTCAAGAA GCTAAGGCAA ATTTTGACAA AGCGCTTTCA 
ATTAATCCTA ACCTTCCCGA TCCTGCCCAA TTTAGCAATA AGAAAAAGCA ATAA
 
Protein sequence
MKFWQKKFNL FLPALLALSI TAIPQMGNAQ DSAPSLEELI QLGNQAAKSK NYAQAERLFY 
NAVKLYPNYP AAYYNLAKAL YDQGKLEEAE TNYRRAILLN PEYAEAYNNL GSVLSDQGKL 
EEAIINFERA IHFNPQYSLA YNNLGTALHE QGHLEEAQMQ YQTAIELDDT NALAYYNLGL 
VLRDQGKTQE AKANFDKALS INPNLPDPAQ FSNKKKQ