| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1578 |
|---|
| Symbol | |
|---|
| ID | 7109578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1739154 |
|---|
| End bp | 1740647 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643479844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002376885 |
|---|
| Protein GI | 218438556 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.122885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGA CAGCCTTAAG TCATCGAGTT AGGCGCAGTC TCATCGCCGG ACTGCTGACC
GGTAGTAGCT TCATGGGACA ATGTTGGTAT CCTCAACCTA GCCAAGCCGC CATTAACGCC
TACTGCCAGT TAACCCCCCA AGAAGCCTCA ACTAAAGAAA ATTTGCTGCA AACAGCCTTA
AAAGGGAATG TAGAAGCGGA AAAAGACTAT GACGCACTGG TGAGAAAACA CGCAGAATTA
TTACAGCGCT GTCGCAACCA AACCTGGCCA CAAGAACAGG CTATCTGGCT ACGATTATAT
CCCTGTGATG TTCGTCCGGG TTCGATCGAT GCTGTTTTAG ACCGGATTGT TAATAAAGGT
TACAATACTG TTTATCTTGA AGTGTTTTAT GATAGTCAAG TGTTGCTCCC TCCGAATGAT
AATCCGACGG AATGGGATAC CGTTGTCAGA ACTCCTGGGG CTGAAAATGT AGATTTATTA
GCAGAAACGA TTAAAAAGGG ACGGGAAAGG GGATTAAAAA TCTATGCTTG GCTATTTACC
CTCAATTTTG GTTATGTCTA TTCTCAACGT CCAGACCGTC AGGATGTACT AGCCCGCAAT
GGAACAGGAC AAACCAGTGT ATCTTATGTT CACGATCAAT CACAAGGATT TATTGACCCT
TATCATCCCC AAGCCCAACG AGACTATGCT CAATTAGTTA ATGCTATCCT AAAACGACAA
CCGGACGGAG TATTATTTGA TTATGTACGC TATCCCAGAG GGACAGGAGC AAAATCCGCC
GCCGGACAAG TAAAAGATTT ATGGATTTAT GGCAGTGCCT CTCGACAAGC TTTATATGAT
CGGGCATTAA ATAATAAAGG ACGGGCGTTA ATTGAGCGTT ATGTGACTCA AGGGTATATT
ACCGCTAATG ATATCGTAGC CGTTGATAAC CTTTATCCTG AAGAAGGTTC TCCTCTTTGG
CAAGGGCGCA CCCCTCCCCC TAACGAAATG CAATCTACCG CTAGCGCTCG CTTTGAACGG
TTGAGATATG AATTATGGTA TCTTGCCGTT GCTCATGCTG CCCAAGGGGT AGTTAATTTT
TTAACAATGG CGACTACCCC GGTACAACGT CGAGGATTAG TAGCCGGAGC GGTATTTTTC
CCCGATGGGA ATCAAATTGT CGGAGAAACC GGTTTTGATT CTCGCTTACA ACCTTGGGAT
AAATTTCCCC CCTCAATAGA ATGGCATCCC ATGTCTTATG GGATTTGTGG AAATCCTAGC
TGTATTGTTC AACAGGTTAA ACGAGTCACG GGGATGGCCC CCCAACAAGT TAAAATTATT
CCTGCACTGG CGGGGTTATG GGGGCGAGAT TATGACAAAC GCCCCTCTTT AGAGGAGCAA
ATGAGAGCCA TTCGCTCGGC TGCCCCTCAA ATTAATTCTA TTAGTCATTT TTCTTTTTCT
TGGCAAGAAC CGGACATCGA AAATGAGCGT CGTTCTTGTC AGTTTAACAT TTAA
|
|---|
| Protein sequence | MNKTALSHRV RRSLIAGLLT GSSFMGQCWY PQPSQAAINA YCQLTPQEAS TKENLLQTAL
KGNVEAEKDY DALVRKHAEL LQRCRNQTWP QEQAIWLRLY PCDVRPGSID AVLDRIVNKG
YNTVYLEVFY DSQVLLPPND NPTEWDTVVR TPGAENVDLL AETIKKGRER GLKIYAWLFT
LNFGYVYSQR PDRQDVLARN GTGQTSVSYV HDQSQGFIDP YHPQAQRDYA QLVNAILKRQ
PDGVLFDYVR YPRGTGAKSA AGQVKDLWIY GSASRQALYD RALNNKGRAL IERYVTQGYI
TANDIVAVDN LYPEEGSPLW QGRTPPPNEM QSTASARFER LRYELWYLAV AHAAQGVVNF
LTMATTPVQR RGLVAGAVFF PDGNQIVGET GFDSRLQPWD KFPPSIEWHP MSYGICGNPS
CIVQQVKRVT GMAPQQVKII PALAGLWGRD YDKRPSLEEQ MRAIRSAAPQ INSISHFSFS
WQEPDIENER RSCQFNI
|
|---|
| |