Gene PCC7424_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1423 
Symbol 
ID7108359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1567169 
End bp1567888 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content41% 
IMG OID643479690 
ProductWD-40 repeat-containing protein 
Protein accessionYP_002376735 
Protein GI218438406 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATA CTCGACTTAT ACCGGCTTTT TTAATGGGAC TTGTTGGGGC TTTTATTCCT 
CTATCCACAG TCAGGGGAAT TTCTGCCCCC TTAGAAATGA TCGCCCAAAA TATGACGGTT
CGTCTAGAAG GACGTACCTC CGTAGGCACT GGGGTTTTTG TGGAACGTCA GGGAAAAACT
TACTACATTT TAACCAGTGA TCATGTGGTC AAACAGCCGG GCAATTATAT TATTGTTGCT
CCCGATCGTA AATGTTATCA AGTGAGTTCT TCTTCCATTA ATAGGATTTC TGGGTTAGAT
TTGGCAGTGA TTCCCTTAAC GAGTAATTTA TCCTATCAAA TTGCTAATTT AGGGAATTCC
GATCAATTAA CTCCCGGACA AAACGTTTAT GTGAGTGGTT GGACTCGTGT GAATGATTTG
TTGAGAGGAT TGGTTTTTTT TGGTTCATTA GGGGAAATTA CGGAAGTCAA TTCCAAACTT
CCCCAAGGGT ACTCGATCAC TTATACTAAT TTGGTTAGAG TGGGGATGAG TGGAGGAGGA
ATTTTAGATG AGCAAGGGCG CTTAATTGGG ATTAATGGAC TTGTTCGCTA TGCGGCTAGA
AATTCCGATA CTATTGTCGC TTCAGGCATT GGAATTAATC AATTTTTACG CTGGCGTTCT
TCTTTGAAAA AACCCCTTTC GTCCCCCCTC CAAGAACCGA AATCTTGTTC TAGTTATTAG
 
Protein sequence
MHYTRLIPAF LMGLVGAFIP LSTVRGISAP LEMIAQNMTV RLEGRTSVGT GVFVERQGKT 
YYILTSDHVV KQPGNYIIVA PDRKCYQVSS SSINRISGLD LAVIPLTSNL SYQIANLGNS
DQLTPGQNVY VSGWTRVNDL LRGLVFFGSL GEITEVNSKL PQGYSITYTN LVRVGMSGGG
ILDEQGRLIG INGLVRYAAR NSDTIVASGI GINQFLRWRS SLKKPLSSPL QEPKSCSSY