Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1423 |
Symbol | |
ID | 7108359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1567169 |
End bp | 1567888 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643479690 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_002376735 |
Protein GI | 218438406 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTATA CTCGACTTAT ACCGGCTTTT TTAATGGGAC TTGTTGGGGC TTTTATTCCT CTATCCACAG TCAGGGGAAT TTCTGCCCCC TTAGAAATGA TCGCCCAAAA TATGACGGTT CGTCTAGAAG GACGTACCTC CGTAGGCACT GGGGTTTTTG TGGAACGTCA GGGAAAAACT TACTACATTT TAACCAGTGA TCATGTGGTC AAACAGCCGG GCAATTATAT TATTGTTGCT CCCGATCGTA AATGTTATCA AGTGAGTTCT TCTTCCATTA ATAGGATTTC TGGGTTAGAT TTGGCAGTGA TTCCCTTAAC GAGTAATTTA TCCTATCAAA TTGCTAATTT AGGGAATTCC GATCAATTAA CTCCCGGACA AAACGTTTAT GTGAGTGGTT GGACTCGTGT GAATGATTTG TTGAGAGGAT TGGTTTTTTT TGGTTCATTA GGGGAAATTA CGGAAGTCAA TTCCAAACTT CCCCAAGGGT ACTCGATCAC TTATACTAAT TTGGTTAGAG TGGGGATGAG TGGAGGAGGA ATTTTAGATG AGCAAGGGCG CTTAATTGGG ATTAATGGAC TTGTTCGCTA TGCGGCTAGA AATTCCGATA CTATTGTCGC TTCAGGCATT GGAATTAATC AATTTTTACG CTGGCGTTCT TCTTTGAAAA AACCCCTTTC GTCCCCCCTC CAAGAACCGA AATCTTGTTC TAGTTATTAG
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Protein sequence | MHYTRLIPAF LMGLVGAFIP LSTVRGISAP LEMIAQNMTV RLEGRTSVGT GVFVERQGKT YYILTSDHVV KQPGNYIIVA PDRKCYQVSS SSINRISGLD LAVIPLTSNL SYQIANLGNS DQLTPGQNVY VSGWTRVNDL LRGLVFFGSL GEITEVNSKL PQGYSITYTN LVRVGMSGGG ILDEQGRLIG INGLVRYAAR NSDTIVASGI GINQFLRWRS SLKKPLSSPL QEPKSCSSY
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