| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1386 |
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| Symbol | rimM |
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| ID | 7111286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1526233 |
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| End bp | 1526856 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643479652 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002376698 |
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| Protein GI | 218438369 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.594776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGATT GGTTAGAAAT AGGAACAATA GTCGCTCCCC AGGGATTAAA AGGAGAGGTA
AGAGTCGCTT CTGAGTCCGA CTTTCCCGAA AGATTCGAGC AACCCGGAAA ACGTTGGTTA
CTTCCTCCTA ATAGTGTACA AGTTCAAGAA GTCGAATTAC TCAACGGCAG ATATATTCCC
GGCAAAAAAA TTTACGTTGT ACAACTAGCA GGAATAGATC ATATCGATCG GGCCGAAGAA
TTACGGGGCT ATAAAATTTT AGTCAAAAAA AGCGATCGTC CTCAACTCGA AGAAGACGAA
TATCATGTTG CTGACTTAGT TAACTTAGAA GTTTATCATC AACTGACGGG GGAAAACCTA
GGAATCGTGA CTGATATTTT ATCAGCCGGC AATGATTTAT TAGAAGTCAC CCTTCATCAA
CAACCAGAAA GAGAAGAAAA ACCCGAACCG GATTTATCTA AAGTCTCAAG AAAGAGTAAA
CTTCGCAAAC TTAAACCCAA ACAACGAAAA CCGGCCACCC TACTCATTCC CTTTGTCAAA
GAAATTGTTC CGATCGTCGA TCTAAAAACC GGGCGTATCG AAATTAAACC CCCGCCGGGG
TTATTGGAAA TGAACGAAAA ATAA
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| Protein sequence | MDDWLEIGTI VAPQGLKGEV RVASESDFPE RFEQPGKRWL LPPNSVQVQE VELLNGRYIP
GKKIYVVQLA GIDHIDRAEE LRGYKILVKK SDRPQLEEDE YHVADLVNLE VYHQLTGENL
GIVTDILSAG NDLLEVTLHQ QPEREEKPEP DLSKVSRKSK LRKLKPKQRK PATLLIPFVK
EIVPIVDLKT GRIEIKPPPG LLEMNEK
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