| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1227 |
|---|
| Symbol | |
|---|
| ID | 7109773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1348807 |
|---|
| End bp | 1349778 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643479495 |
|---|
| Product | solanesyl diphosphate synthase |
|---|
| Protein accession | YP_002376543 |
|---|
| Protein GI | 218438214 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR02749] solanesyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCAA CTACTTCTTT ATTTGCTCCC GTTGAAACCG ATCTTCGTCT CCTGAGTGAG
AACCTGAAAA AGCTTGTTGG CGCTCGTCAT CCCATTCTCG CGGCGGCAGC AGAACATCTG
TTCGATGCAG GAGGAAAACG AATTCGACCG GCGATCGTGT TATTAGTATC AAAGGCAACA
ATGCTAGATC AAGAGATTAC CTCTCGGCAT CGGCGACTGG CAGAAATTAC CGAAATGATT
CATACAGCTA GTCTAGTTCA TGACGATGTT GTCGATGAAG CGGAGTTACG TCGTAATGTC
CCCACTGTTA ATAGTTTATT CGACAATCGA ATTGCTGTGT TAGCGGGAGA TTTTCTTTTT
GCTCAGTCAT CATGGTATTT AGCCAATTTA GATAATTTAG AAGTTGTTAA ACTTTTATCT
GAAGTGATCC GAGACTTTGC TGAAGGAGAA ATTCAGCAGG GAATTAATCA ATTTGATACG
GGTATAACCT TAGACGCTTA CCTCGAAAAA AGTTATTACA AAACAGCTTC TTTAATGGCT
AATAGTGCCA AAGCGGCCAG CGTTTTAAGT GATGTTGGAC GAGATATCAC AGAACACTTG
TACAATTACG GACGTTATTT AGGATTAGCC TTTCAAATAG TCGATGATAT CTTAGATTTT
ACCTCTCCTA CGGAGGTATT AGGTAAACCT GCTGGCTCGG ATTTAGCCAG TGGTAATATT
ACGGCTCCGG CGTTGTATGC TATGGAGGAA AACCCCTATT TAGAAGTCTT AATTGAGCGA
GAATTTAGTG AAGACGGAGA CCTTGAAAAA GCTTTAAATC TGGTTATGGA AAGTAACGGG
ATTGAGCGAT CGAGGGAATT AGCTTCTAAT TATTCTCAGT TGGCTTTGCA AAATTTAAAA
TGCTTGCAAC CTTCCCCATC TGGTCAGGCT TTACAAGATA TAGTCGATTA CAATTTGAGT
CGGATTTATT AA
|
|---|
| Protein sequence | MISTTSLFAP VETDLRLLSE NLKKLVGARH PILAAAAEHL FDAGGKRIRP AIVLLVSKAT
MLDQEITSRH RRLAEITEMI HTASLVHDDV VDEAELRRNV PTVNSLFDNR IAVLAGDFLF
AQSSWYLANL DNLEVVKLLS EVIRDFAEGE IQQGINQFDT GITLDAYLEK SYYKTASLMA
NSAKAASVLS DVGRDITEHL YNYGRYLGLA FQIVDDILDF TSPTEVLGKP AGSDLASGNI
TAPALYAMEE NPYLEVLIER EFSEDGDLEK ALNLVMESNG IERSRELASN YSQLALQNLK
CLQPSPSGQA LQDIVDYNLS RIY
|
|---|
| |