Gene PCC7424_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1103 
Symbol 
ID7112088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1207328 
End bp1208386 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content40% 
IMG OID643479370 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002376422 
Protein GI218438093 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAG GAGTCAGTTA TTTAATCTAT AGATTGAGTC AAGTTTCAGG ACGAGTCTAT 
TTAATCATAG CGGTTTTAAT TTTTGCGGCG GCGAATTCTG TCACTCGCAA ATTAACGGAC
TTGGGGGCAC TTCATCTAAT TGAGGGGAGA AATCCTTTCT CATTTTGTAA TATTCTGTTT
GTGGGTAATA TTTGTGCTTT TTTTACTTTA TGGGTTGTGT ATCGGCAACA ATTGAGTAAA
AGTAATTTTC GCCAATTGTC CTATAAAAAT TGGTTTGGGT TAATGGGGGT GTCTATTTTT
GCTGGAGTGT TAGCCCCTTC TCTTATTTTT TTAGCTCTTG AAAGGACTGC TGTTAATAAT
GTAATTTTGA TTGGACGGAT TGAAACCTTT ATTATTTTAG CTTTATCCGT TTTTGTTTTA
AAGGATCGAG TTAATTTTTG GGGTGTGGCG GGTTCAATTG TGTCATTTAT TGGGGTGATA
CTGACGATTT TTTTACAATC TCCGTCGGGA AATGAGGTTA ATATGGGAGG GTTTCAAATT
GGCGCGGGAG AGTTGATGAC GGCGGCGGCG GCTCTAGCTT CGGCTGTTGC TAATATTATT
AGTCGGGTGA CGTTGGCACA AGTTTCATTA GGGTTTTTTA ATCTGGTTAA AACTATTTTG
TCAACGATTA TTTTTTTTGT TATTGTGCTT AAATTATTTG GCCCCCACCA TTTTGTAGAT
GTGTTTTATC CCGCACTTTG GCAGTGGATG TTCATTTATG GCGCTGTCAT TGTTGTGGGA
GGACAACTCT GCTGGTTTGC CGGTTTAAAA AGGACAACTG GGAGTGAGGT GGCTTTGGCC
AGTTCGTTTT ATCCTCTTGC AGGGGTAATA GCTGCCTATT TAATTTTAGG AGAAGCCCCT
ACTATGGCTC AATATGTGGG TGGAATTGTG ATTTTGATAG GAATTATTCT ATCAGTGCTG
GGAGAACGAT ATCGTCAACC GGAGGCTAAA AATCTTCCGA TTTCCTCGGC TCAACAAGAA
ATCGATAAAG AGACGGAAAT GGGATTTAGA GGGATTTAA
 
Protein sequence
MQRGVSYLIY RLSQVSGRVY LIIAVLIFAA ANSVTRKLTD LGALHLIEGR NPFSFCNILF 
VGNICAFFTL WVVYRQQLSK SNFRQLSYKN WFGLMGVSIF AGVLAPSLIF LALERTAVNN
VILIGRIETF IILALSVFVL KDRVNFWGVA GSIVSFIGVI LTIFLQSPSG NEVNMGGFQI
GAGELMTAAA ALASAVANII SRVTLAQVSL GFFNLVKTIL STIIFFVIVL KLFGPHHFVD
VFYPALWQWM FIYGAVIVVG GQLCWFAGLK RTTGSEVALA SSFYPLAGVI AAYLILGEAP
TMAQYVGGIV ILIGIILSVL GERYRQPEAK NLPISSAQQE IDKETEMGFR GI