Gene PCC7424_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0325 
Symbol 
ID7108943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp355688 
End bp356545 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content40% 
IMG OID643478600 
ProductABC-2 type transporter 
Protein accessionYP_002375661 
Protein GI218437332 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.606531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG AAAACAAAGT AGTGAAGCGA ACTACCGCAA GTGAGCTTAG GCATCCTATG 
GAGCTACTGG CCAAAATGGG GAGAGACCTA ATAGCATCAA GGGAGTTAGC CTGGCAGTTA
ATGAAGCGCG ATATTCAAGC GGAATATCGT CAATCAATAT TGGGATATTG TTGGGCATTT
TTACCTGCCC TTGTTACAGC CACTGGACTG ACACTCGCTA GCCGGTCAAA AGTGCTTAAC
GTTGGAGTAA CTGATATTCC TTATCCTGCC TTTGTCATGA TTAGCATGGT TCTCTGGCAG
ACATTCACTG AATCTCTCAA TGGGCCAGTG CAAATGGTGA CAAAATCGAA GCAAATGTTA
GCGAGAGTCA ATTTCCCTCG TGAAGCTTTG CTAGTTGCTA CTGTAGGTAA GATTCTTTTT
AATTTAGGAA TTAAACTAAT TTTAGTAATC GGGATATTTC TCTGGTATCG TATTTCGATA
AGCTGGAGTA TATTCTTAGC CCCTGTGGCT TTAATACATT TAATGCTATT AGGAATAGCA
ATAGGAACAT TTTTGTGTCC TTTTGCCATG TTATACCAGG ATTTTTCTAA AGGAATAGTT
TTAATGACAG GTTTTTGGCT ATTTCTGACT CCGGTCTTCT TTCCAGAACC AAAAGGTGCA
GGCTCTTTCG CTACTCTGGT TAGACTTAAT CCCGTTACCC CATTATTGGT AACAACTAGA
GAATTAGCAA CAACAGGAGC AATTACCAAT GAAGTCGGTT TTTGGATAGC TAGTTTAATA
GCGATCGGCG GATTCCTAAT TGCCTGGCTG ATGTATCGAT TAGCAATGCC ATTTGTAATA
GAGAGGATTA GTTCTTAA
 
Protein sequence
MKFENKVVKR TTASELRHPM ELLAKMGRDL IASRELAWQL MKRDIQAEYR QSILGYCWAF 
LPALVTATGL TLASRSKVLN VGVTDIPYPA FVMISMVLWQ TFTESLNGPV QMVTKSKQML
ARVNFPREAL LVATVGKILF NLGIKLILVI GIFLWYRISI SWSIFLAPVA LIHLMLLGIA
IGTFLCPFAM LYQDFSKGIV LMTGFWLFLT PVFFPEPKGA GSFATLVRLN PVTPLLVTTR
ELATTGAITN EVGFWIASLI AIGGFLIAWL MYRLAMPFVI ERISS