Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0148 |
Symbol | |
ID | 7107835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 161272 |
End bp | 163908 |
Gene Length | 2637 bp |
Protein Length | 878 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643478425 |
Product | alpha amylase catalytic region |
Protein accession | YP_002375486 |
Protein GI | 218437157 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.0174055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT TGATTGTACA CTTCAAAAGA CCGAACGGAT GGCAGGAGAA GATAAACATT CACTATTGGG ACACTTCTCC GAATGCGATC GCTACTAATT GGCCAGGAGT GTCGATGATC GAGGAAGAGA ACGACTGGTT TATTTATCGG TTTGAAGGGG TAGAAACGGC GAATATTATT TTTAACGATG GGGAGGGAAG ACAAACCGGT AATTTAAGAC GAGATGGGGA AGGATGGTTT TTTATCGATA ACATCTGGCA TAATCAAAAC CCTGAACGTC CTTTAGTGCC GGTTATTACC TCTCTAACGG GTGCAACAAC TTATCTAGAA CCCCAAAGGG TTATTTTAGA AAGCAGCAAC CCTGATGATA TCATTTATTA TACCACTGAC GGAACTCTGC CAACCCCTAA CTCTCTACGA TATACTGAAC CGATCGAAGT CAACACCACC ACTACTATAC AAGCATTGGG GATGAATTCA GAGGGAGAAA CTGGGGCAAT TACGACCCTG ATCTATACTA TAGATCCCAA TGCAGATTTA GAACGACCGG AAGTGATCCC CTCTCAACCG TCTGGAACTT ATGAAAACCC GATTTCTGTT CGGTTTACCA TTCGAGATAA TCGTCCGGCA CCGGTTACTG CTTACTATAC CACCGATGGC TCAGAACCGA GTCCAGGATC GAGCATTTAT ATCGAAGGAG ATGCTTTTAA TGGGTTAGTA GGGCCCGAAA TTGCGATCGA AGATGCAACG AGTATTCGTT TTTATGTGGT TGATGCTGCC GGTAATGAAA CCCGAGAGAC TTATTCTTAT AATATTGGGC CAGTCATACA ACCGAGAGAT TTTCGGGAAG AAACCATTTA TTTTGTCATC ACCACTCGCT TTTATGACGG TGATCCGAGT AATAACTTTT TCTGTCGAGA CCGGATCAAA TTTAATCCTA CCACTGGCGA AGCAGAAGAT CCCCACTGGC GAGGAGATTT TAAAGGACTG ATTCAAAAAC TCGACTATAT TCGAGATTTA GGGTTTACTG CTATTTGGAT TACTCCACCG ATCGAAAACC GTAGCGGATT GGATTATCAT GGCTATCATG GGTACGACTG GACAAGTATA GACCCCCGTT TAGAATCTCC CGATGCAACG TACCAAGATT TAATTAATGA AGCTCATGCT AGAGGGATTA AAATTATTCA AGATGTAGTG ATTAACCATT CCTCTCAATA CGGAATTCGC GGGAAAGTTT GGATCGATCA TTTACCGATT AAATATTATG TTCCTCAAGG ATCACAACAA GGACAGATTA ATTATGGGCC CTATCAAGGC AATTTAGGGA ACTATGCTTA TCCTGGCCGG GAAGATAATG ATAATCCTCT AGCACCCCAA TGGTATCAAG AACGGGTAAA CTCAGATCCA GAAGGGATAG AACCCTTGAT CGATCCTTTA ACCGGCGCGA CTGTTCCAAG TCCGGGGTAT AATCCTAACC GTTTCTTTGG CATTGATGCC AATACCCTCG ATCCGGAATG GTATCATCAA GAGGGATTTA TGGCCGGGGG AGACTGGGAA AGCGCCTCTC TTCAAACGAA ACACATGGCC GGAGACTGTA TTGATTTGGC CACTGAACGA CCCAATGTGA AAGATTATAT TATTAACTCC ATCTGTCGTT ATTTAGACAT GGGAGTCGAT GCGCTGCGAA TTGATACGGT TAAACATATA GAACGGGGTA ATCTCCTAGA CTATATTAAC GCCTGGAAAG CGTATAAACC CGGTTTATTC GTGTTTGGAG AAAACTTAGT TAAAGGAACC GGTTGGGGGG ATCTATTTGG AGATGATAAC GGGCCGTCAT TTATTCGCCC TTGGTGGTAC ACTCGACTAG GGGATGATGG GAGAAACCCT AATTCTGGAG GTGATTCAGG ATTTTCTGTG TTAGATTTTT CCTTATTTTC GACGTTTCGG GATAATGTCA GTCGAGGGAC TTATGGGGGA ATTGGTGCTA ATTTAAGTAG AGATTGGGTG TATGGGGATG CAACTACCCT GGTTACTTTC TTACAAAATC ATGATGTAGG GCCAGATAAT GATTTTCGCT TCCGCTTCCG GGGAGATCAA TGGATGGCGG CGGCGACCTA TAATATGCTG TGGACAATAC GAGGAATTCC CTGTCTCTAT TTTGGGGAAG AAATTGAGTT TATGAAAGGC GCTCCTCAAG ATATTATTGG CAATGATGAT ACCTTAGATC AAACCGGTAG GGCCTATTTT GGCGATCATC TTGATGATGA AACCATAGGA ACGACCCAAA GTCATCCCCT TTATCGCCAT ATTAAACGAC TCAATCTCAT TCGTCGTAGT GTTCCTGCCC TGCAAAAAGC GCCCATGAGT TATGTTAATG AGTGGGGAAG TGGAATGAGT TTTGTGCGAG ATTATAATAA TGGCGAGAGT TATGCGGTGG TCGGTTTAGC TATTGGTGGG GATCAAAATA TTACTGTAGG AAATATTCGC AATGGAACTT ATCGAGATGC CGTAACTGGT AATACTATTG AAGTGGGAAA TGGGGTAATT TCTTTTAATG TACCGGGAAA TTCTGCCGGC ATTTATGTTC TTAATGGTTC TGGGAAAATT GGCGAAGATG GAGTCTACCT AAGATAA
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Protein sequence | MTDLIVHFKR PNGWQEKINI HYWDTSPNAI ATNWPGVSMI EEENDWFIYR FEGVETANII FNDGEGRQTG NLRRDGEGWF FIDNIWHNQN PERPLVPVIT SLTGATTYLE PQRVILESSN PDDIIYYTTD GTLPTPNSLR YTEPIEVNTT TTIQALGMNS EGETGAITTL IYTIDPNADL ERPEVIPSQP SGTYENPISV RFTIRDNRPA PVTAYYTTDG SEPSPGSSIY IEGDAFNGLV GPEIAIEDAT SIRFYVVDAA GNETRETYSY NIGPVIQPRD FREETIYFVI TTRFYDGDPS NNFFCRDRIK FNPTTGEAED PHWRGDFKGL IQKLDYIRDL GFTAIWITPP IENRSGLDYH GYHGYDWTSI DPRLESPDAT YQDLINEAHA RGIKIIQDVV INHSSQYGIR GKVWIDHLPI KYYVPQGSQQ GQINYGPYQG NLGNYAYPGR EDNDNPLAPQ WYQERVNSDP EGIEPLIDPL TGATVPSPGY NPNRFFGIDA NTLDPEWYHQ EGFMAGGDWE SASLQTKHMA GDCIDLATER PNVKDYIINS ICRYLDMGVD ALRIDTVKHI ERGNLLDYIN AWKAYKPGLF VFGENLVKGT GWGDLFGDDN GPSFIRPWWY TRLGDDGRNP NSGGDSGFSV LDFSLFSTFR DNVSRGTYGG IGANLSRDWV YGDATTLVTF LQNHDVGPDN DFRFRFRGDQ WMAAATYNML WTIRGIPCLY FGEEIEFMKG APQDIIGNDD TLDQTGRAYF GDHLDDETIG TTQSHPLYRH IKRLNLIRRS VPALQKAPMS YVNEWGSGMS FVRDYNNGES YAVVGLAIGG DQNITVGNIR NGTYRDAVTG NTIEVGNGVI SFNVPGNSAG IYVLNGSGKI GEDGVYLR
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