| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4207 |
|---|
| Symbol | |
|---|
| ID | 8135206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4753124 |
|---|
| End bp | 4754806 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644867525 |
|---|
| Product | phosphoethanolamine transferase |
|---|
| Protein accession | YP_003019757 |
|---|
| Protein GI | 253690567 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTG TAGCATCTTT TTCGCAACCC AAATTATCGT TTGTCCTGGC AATTTATATT
GGTCTTTTTC TCAATATCTC AGTGTATTAT CGCCGGGTTG ATTATTTTTC ACTCTCTGCT
GGTAATCAGG TTCCAACGTT TATTCCCGCT CTTGTCGAAT TGACGGCGAG TATCTTATTC
ACCTTTTTCC TGATGAGAAT TATTTCACTC GGGGGACGTC GTTTTTATCG GGTTATCGCT
TCTCTCCTGG TGCTGATTTC CGTTGCTGCC AGCTATTACA TGACGTTTTT TAATGTCGTG
ATCGGCTATG GCATCATTGC TGCGGTCATG ACCACCGATA TTGATCTTTC TAAAGAAGTT
ATTGGTTTTC GTTTTTTCCT ATGGATGTTG GTGGTAAGTG CGCTGCCGCT GTTTTTGATC
TGGAAGAACT CGCTGCGCCA TACGCTGATC GAACAGCTTA AATCGCCGGG GAAGCGTTTA
GTTCCTCTTC TGGTTCTTGT CGCCGTCGTC GCGCTGGTTT GGATGCCGAT TCGCTATATG
GACAACATTC AGTCGGTGTC CGAGCGGGAA TCCAATGTGG ATTTGCCCAG CTATGGTGGT
GTCGTCGCTC ACTCGTATTT GCCTTCTAAC TGGTTGTCTG CGTTAGGTTT ATTTGCATAC
ACGAAGTATG ACGAAAGTCA GGACTCCTCC AATCTTTTCG ATCCGGCTCA GCATTTTACT
TATGTCCCGC CAAAAGGCAT TGATGATACC TATGTGATTT TCATTATCGG TGAAACCACC
CGCTGGGATC ATATGGGGCT ATTAGGCTAC GAGCGCGATA CGACGCCAAA GTTATCGAAA
GAAAAGAATC TGGTCGCATT CCGTGGTCAG TCATGTGATA CCTCAACCAA GCTTTCCATG
CGCTGTATGT TTGTGCGAGA AGGCGGTACG GAAGATAACC CGCAGCGAAC GCTGAAAGAG
CAGAACATCT TTGCCGTGCT GAAAGAGCTG GGTTTTACCT CTGAGCTGTT TGCTATGCAA
AGTGAAGTGT GGTTCTACAA TAGCATTGAG GCGAACAACT ACTCTTTCCG CGAAATGATT
GCGTCAGAGA AACACAATGA CGGTAAATCG GTGCAGGACA TGTTGCTGGT CGATGAGGTT
AAGGAATCGC TGGCACGTTA TCCTAAAGGC AAGCATTTGA TCGTGCTGCA TACCAAAGGT
TCCCATTACC TGTATTCCAT GCGCTATCCT CGCAGCTATG CGCGTTATCA GCCAGAGTGT
ATGGGCGTTG ATGCCTCCTG TTCGCGTGAG CAGTTGATTA ATGCTTTCGA TAATAGCGTG
CTCTATACCG ATAGCTTTAT TGATAGCGTG ATCGATCAGG TTCGGGATAA GAAAGCTATC
GTGTTTTATG CTTCCGATCA CGGTGAATCG ATTGATGAAA ACTATCATTT GCACGGCACG
CCGCGTCAGA TGGCGCCGCC CGAGCAGTTC CGTTCACCAA TGATGGTATG GACGTCGGAT
AAGTTTCTGG CTGATACCGA TAATCTGCAA GCGTTTGAGC AGTTGAAAGG TCAGCAGCGC
GTTGGTAAAA CACATCGCCA TGAAGAGCTG TTTGATACGA TTCTTGGATG CCTGGGATAC
ACATCGCCTG ACGGCGGTAT TAACCCTAAA AATAACTGGT GTCAGAAACC TGCTATACCC
TAA
|
|---|
| Protein sequence | MKFVASFSQP KLSFVLAIYI GLFLNISVYY RRVDYFSLSA GNQVPTFIPA LVELTASILF
TFFLMRIISL GGRRFYRVIA SLLVLISVAA SYYMTFFNVV IGYGIIAAVM TTDIDLSKEV
IGFRFFLWML VVSALPLFLI WKNSLRHTLI EQLKSPGKRL VPLLVLVAVV ALVWMPIRYM
DNIQSVSERE SNVDLPSYGG VVAHSYLPSN WLSALGLFAY TKYDESQDSS NLFDPAQHFT
YVPPKGIDDT YVIFIIGETT RWDHMGLLGY ERDTTPKLSK EKNLVAFRGQ SCDTSTKLSM
RCMFVREGGT EDNPQRTLKE QNIFAVLKEL GFTSELFAMQ SEVWFYNSIE ANNYSFREMI
ASEKHNDGKS VQDMLLVDEV KESLARYPKG KHLIVLHTKG SHYLYSMRYP RSYARYQPEC
MGVDASCSRE QLINAFDNSV LYTDSFIDSV IDQVRDKKAI VFYASDHGES IDENYHLHGT
PRQMAPPEQF RSPMMVWTSD KFLADTDNLQ AFEQLKGQQR VGKTHRHEEL FDTILGCLGY
TSPDGGINPK NNWCQKPAIP
|
|---|
| |