Gene PC1_4198 details

Gene Information

• Locus tag: PC1_4198
• ID: 8135196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4740254
• End bp: 4742149
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644867515
• Product: 5'-Nucleotidase domain protein
• Protein accession: YP_003019748
• Protein GI: 253690558
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CGCTTTTGTC ACTTCTGCTT TGTTTGAGTA CTTCTGCTAT GGCCGCTCAA 
GAACCGATAA ATATTACGAT TCTGGGGACA TCCGACCTGC ACGGCACCTT TGTTCCCTGG 
GATTACGCCA CCGATACCGC CAACATGGCG GGCAGCCTGA GCCAGATCGC CACGCAGGTG 
CATAAAGTTC GCGCACAGCA GCCGAATGTC ATTCTGGTTG ATGCGGGCGA CACAATTCAG 
GGCAACTTTG TCGAAACCTT CAAAAATGAC AAAACCAGCC CAATGATCCT CGGTTTCAAC 
GCTCTGAATT ATGACGTTTG GGTAATGGGC AACCACGAGT TCGATTTCGG CCTGAACGTG 
CTCAACACCT CGCTTGACCA GTTCAAAGGC ACCGCGCTGG CGGGCAACAT TTTTTGGGAA 
AGCGGTAAAC CTTACTTACC CGCCTATAAA ATTGTCGAAC GGCAGGGCGT GAAGATTGGC 
ATCATCGGGA TGGATACGCC GATGACCGCT GAATTCGCCA AAGGCACTGA CCGCGTGAAA 
GGACTGAACT TCACCGATCC CGTCGGGGCG GTAAAAACCG TGATCCAGCA AATTCACGAT 
AAGGTCGACG CCATCGTGCT GGTTGCCCAT ATGGGCATCG ATAACGAGAA CCAGCGGCCG 
GGCACCGGCG TGGGCGATAT TGCTCGCGCG AACCCAGAAC TAGCCGCTAT CGTCGCGGGC 
CATATGCACG TAAAAGTGGA TAAAGAGGTG ATAAATGGCG TGATCGTCAC CGAACCAGAC 
AAATATGGCC GCGCACTGTC GCGCATCGAT TTGCAGTTTG AACAGCAGAA CGGCAAATAC 
GTACTGATCA ACAAAGACAG CTATACCTAT TCAATTAAGG ACGTGGATTC TGACCGCAAG 
ATGGAAGATA TCTACGAGCC TTATCACAAT ACCCTGCGCG CCAACGCCAA CCGTCCGATT 
GCGCAGCTCC TCGGGCACGA TCTGGTGCCG CAAGATGCCG TGAAAGGCAT TCCTCAGGTA 
CACGTACAGG ACACGGGTAT CAGCGCCCTG TTCCAGGAAG CCAGTCGCCA TTACGCCCCC 
AAAGCGCAGG TTATCGCACT GCAAATTGAT AACGATCGAC CCAAGCTGAA CGTCGGTACC 
ATCTCCGCAA AGGACATTGC CTTTAACTAT CAATATGCTG GCGGTGAAAT CACGGTTTAT 
CAGCTCACTG GAAAAGAACT GAAGAAATAT ATGGAATGGT CAGCGGGTTA TTTCAACCAG 
CTACAGGACG GCGATGTGAC TTACAGTTTC AATCCACAGC GCCGCGCGTC CAAATATTCT 
ACCAATGATT TCTTCGACGG CGTGACGTAC ACCATCGACC TGACAAAACC TGCCGGGCAA 
CGCATTACCG ACCTGAAAAT GAATAACGGC ACGCCGGTTA CCGACGACAT GCCGATTCGT 
CTGGGTATGA ATAGCTACCG TATGGGCCAC CTGACGCAAA AAGGCGGTGT GCTGGAAGGT 
AGGCAGTTCC CGGTACTGTC GGACACCAAA GCGGAATATG GCGAAGAGGC GGGCACAATT 
CGTAACCTGA CCATCCGCTA TCTGACCGAG GTGAAAAAAG GCCAATACGA AGGCACTGTG 
CCGCAGCGCT GGAAGCTGGC TGGATTGCAG GGCTATGAAC GCGAACGCCA CATCGTCGAA 
TCGCTGCTCA ACAGCGGAAA AATCAGCGTG CCGACGTCAG ACGACGGTCG CTACAGCAAC 
GTGCAATCCA TCAACGTGAA ATCGCTGCTG CTGCCGGATA CCACGCAGAG GGAGAAACGC 
GTGGCGGAGC TGACGCAACA GCGCGACAGC GCCACCAACG CGTTGACCAA ACAGCGGCTG 
AACGATCAAC TGACGATTAT CGCGGCCATA AACTAA 

 

Protein sequence

MKKTLLSLLL CLSTSAMAAQ EPINITILGT SDLHGTFVPW DYATDTANMA GSLSQIATQV 
HKVRAQQPNV ILVDAGDTIQ GNFVETFKND KTSPMILGFN ALNYDVWVMG NHEFDFGLNV 
LNTSLDQFKG TALAGNIFWE SGKPYLPAYK IVERQGVKIG IIGMDTPMTA EFAKGTDRVK 
GLNFTDPVGA VKTVIQQIHD KVDAIVLVAH MGIDNENQRP GTGVGDIARA NPELAAIVAG 
HMHVKVDKEV INGVIVTEPD KYGRALSRID LQFEQQNGKY VLINKDSYTY SIKDVDSDRK 
MEDIYEPYHN TLRANANRPI AQLLGHDLVP QDAVKGIPQV HVQDTGISAL FQEASRHYAP 
KAQVIALQID NDRPKLNVGT ISAKDIAFNY QYAGGEITVY QLTGKELKKY MEWSAGYFNQ 
LQDGDVTYSF NPQRRASKYS TNDFFDGVTY TIDLTKPAGQ RITDLKMNNG TPVTDDMPIR 
LGMNSYRMGH LTQKGGVLEG RQFPVLSDTK AEYGEEAGTI RNLTIRYLTE VKKGQYEGTV 
PQRWKLAGLQ GYERERHIVE SLLNSGKISV PTSDDGRYSN VQSINVKSLL LPDTTQREKR 
VAELTQQRDS ATNALTKQRL NDQLTIIAAI N