| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4075 |
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| Symbol | |
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| ID | 8135073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4611722 |
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| End bp | 4612621 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867393 |
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| Product | carboxylate/amino acid/amine transporter |
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| Protein accession | YP_003019626 |
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| Protein GI | 253690436 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.126831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCATTAC TTACTATCAC CACTATCTTG TGGGCATTTT CATTCAGTCT GATTGGCGAA
TATCTTGCGG GTCAGGTTGA TAGCTGGTTT TCTGCGATGT TCCGTCTGAC GGCGGCGGCA
GTGGTGTTTT TACCATTCTT ACGCCTGCGC GGCTATGCGC CACGCGTTAT TTTCTTGTAT
CTGTTAGTGG GTGCTTGCCA ACTGGGTATC ATGTACCTGT TCGTGTTCCA GGCTTACCTG
TACCTGACCG TACCTGAGTT TTTACTCTTT ACGGTGATGA CGCCGCTTTA CGTCACGCTG
ATTTACGATC TGCTCGCTCG GCAGCGCTTG CGCTGGGGCT ATGTCATGAG CGCTTTACTG
GCGGTATTCG GCGCTGCCGT GATCCACTAT CACGGTGTGA GTGAGCATTT CTGGTGGGGA
TTCTTGCTGG TACAGGCGGC TAACGTATGT TTTGCAGCAG GTCAGGTTGG CTATAAGCGC
CTGATGGAGC TCTATCCGGT GCCGCAGCAC TGTGCGTTTT CCTGGTTTTA TCTAGGGGCG
GCGATCGTGA CGATAACCGC GTGGTTGCTC TTCGGCAATC TGGATAAATT ACCCACCACA
ACCTTGCAGT GGGGCGTGCT GGTCTGGCTG GGGATTGGCG CTTCCGGCCT GGGTTATTTT
ATGTGGAACT ACGGCGCCAC TCAGGTGGAT GCCGGAACGC TCAGCATAAT GAACAACTTT
CATGTGCCTG CTGGGCTCTT GGTCAACTTC GCTATCTGGC ATAAAACGCC AGACTGGCTG
AGTTTTATCG TGGGAACGGT CATTATCACG TCCTCGCTGT GGGTACACCA GCGTTGGGTC
GTGAAGCGTC CTTCACAAAC GGTAAATGCT CACAAGCGTG CTGACGCGCC GAACGAATAA
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| Protein sequence | MPLLTITTIL WAFSFSLIGE YLAGQVDSWF SAMFRLTAAA VVFLPFLRLR GYAPRVIFLY
LLVGACQLGI MYLFVFQAYL YLTVPEFLLF TVMTPLYVTL IYDLLARQRL RWGYVMSALL
AVFGAAVIHY HGVSEHFWWG FLLVQAANVC FAAGQVGYKR LMELYPVPQH CAFSWFYLGA
AIVTITAWLL FGNLDKLPTT TLQWGVLVWL GIGASGLGYF MWNYGATQVD AGTLSIMNNF
HVPAGLLVNF AIWHKTPDWL SFIVGTVIIT SSLWVHQRWV VKRPSQTVNA HKRADAPNE
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