Gene PC1_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3978 
Symbol 
ID8134965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4487531 
End bp4488148 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID644867285 
Producthypothetical protein 
Protein accessionYP_003019529 
Protein GI253690339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0673836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAT TGCAACGCCG AAATCTGATA CTGCTGGCGC TCGGACAAGG GCTGACCGGC 
AGTATTATTT CCCTGATGAC GCTATGTTCT ACGTTGGTTG GCGTATCCAT GACGCCTGTT 
CCACTGCTGA CGACATTACC GATTACCGCG ACGGTGCGCG GCGCGGCGCT GATGATCTAC 
GCCGTTTCCT CATTGATGAC AAAATATGGC AGACGTAATG CGTTCATCAT CGGCACGCTG 
CTGTTAGTGA TGCTGGCGCA ACGGCTGACG CCGATTCAGG TTGTGGCGAT TGGCATGGCG 
TGTAACGTGG TTGGCGTGGC GGTCGCGCTG AGTGGTTTGA CGTTCTGGCA CTTCCTCTTT 
GCGCTGGCGC TGTTCGGCAT TGGGTGGGCG TTTATGTTTA ACGGCGGGAC ATTTATGCTG 
AACGCGTTTA CCCATTCGGT GCATAAATCC CGTTTGCAGG GCATTAACTC GCTGATGATT 
TACGTCCCTA ATGCGTTGGC TTCGCTATCC GCTGGCAGCC TGATGGCGCT GGCCAGCGGC 
TGGTCGCTGG TGAATATGGT CGGTATCGGC ATGCTGTTGT TGCTGGTACT GACACTGTTA 
TTACTGGGAC GGCGCTGA
 
Protein sequence
MDSLQRRNLI LLALGQGLTG SIISLMTLCS TLVGVSMTPV PLLTTLPITA TVRGAALMIY 
AVSSLMTKYG RRNAFIIGTL LLVMLAQRLT PIQVVAIGMA CNVVGVAVAL SGLTFWHFLF 
ALALFGIGWA FMFNGGTFML NAFTHSVHKS RLQGINSLMI YVPNALASLS AGSLMALASG 
WSLVNMVGIG MLLLLVLTLL LLGRR