| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3968 |
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| Symbol | |
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| ID | 8134955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4477923 |
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| End bp | 4478981 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867275 |
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| Product | membrane protein AbrB duplication |
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| Protein accession | YP_003019519 |
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| Protein GI | 253690329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3180] Putative ammonia monooxygenase |
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| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGGA TGTCTCCTTG GATGCAGTGG GGAATATTGC TGTCGGTTTC GTTATCACTG
GGGTTTGGAC TACAGGTTTA CCATGTTCCC GCCGCGCTGT TGCTGGGGCC GATGATGGTC
GGTGTCGTCA TGGGCTTGAA CGGCGCGACG ATTCGCATCC CACCCGTCTG CTTTGCTGGC
AGCAATGCCG TACTGGGCTG TCTGGTAGCA CAAAGCCTGT CTTTTTCTAT TCTGACTCCT
TTGCTGAATG AATGGCCGCT GGTGCTGTTC ATTTTGTTGG CGACGCTGGC GGCCAGCGGA
TTATCTGGCT GGTTACTGGT CAAATTTAGC GAGCTTCCCG GAACGACCGG AACCTGGGGC
GCATCGCCGG GCGGGGCGTC TGCCATGGTT GCCATGTCTG GAGAGTTCGG CGCGGACGTG
CGACTGGTTG CCTTCATGCA ATATTTACGC GTGTTGATGG TGACTGCTTC GGCAGCGTTC
GTGGCACGCC TGAGCTTAGG TGACGAAGCG GCGGAAAACA GTGCGATGCT GGTGTGGTTT
CCTTCGTTGG ACTGGCGTTT TCTGGCGACG CTCGGCGTGG CATTTGGTAG CGCATGGTTA
GCAAGACGCA TGCGTATTCC ATCCGGGGCG CTGCTGGGGC CGATGATTAT CGGTTCGATG
CTGCATGCCA GCGGCACCTT GCACTTGCAA ACCCCGGAGT GGCTGCTGGC GTTGGCCTAC
GCTGTGATTG GCTGGAGCGT GGGTTTATGT TTCACCCGCC CCATCTTTCT ACTGGCAATA
CGCACGCTGC CGCACATGAT GGCGTCGATC GTCGGATTGA TGCTGCTCTG TGGCGGGATG
GCGTGGATGG TGACGAAAAT GATGCCGGTG GATATGCTGA CCGCCTTTCT GGCGACCAGC
CCCGGCGGGC TGGATTCGAT TGCAATTATT GCCGCAGGCA GTCGGGTCGA TATGGCGTTT
GTCATTGCCA TGCAGACGCT GCGGCTGTTT TCGACGCTAG TATTCAGCCC GATCTTATCG
CGCTTTATTT CCCGTCGTGT TGAGGCTGGG AAGGTGTAG
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| Protein sequence | MKGMSPWMQW GILLSVSLSL GFGLQVYHVP AALLLGPMMV GVVMGLNGAT IRIPPVCFAG
SNAVLGCLVA QSLSFSILTP LLNEWPLVLF ILLATLAASG LSGWLLVKFS ELPGTTGTWG
ASPGGASAMV AMSGEFGADV RLVAFMQYLR VLMVTASAAF VARLSLGDEA AENSAMLVWF
PSLDWRFLAT LGVAFGSAWL ARRMRIPSGA LLGPMIIGSM LHASGTLHLQ TPEWLLALAY
AVIGWSVGLC FTRPIFLLAI RTLPHMMASI VGLMLLCGGM AWMVTKMMPV DMLTAFLATS
PGGLDSIAII AAGSRVDMAF VIAMQTLRLF STLVFSPILS RFISRRVEAG KV
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