| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3933 |
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| Symbol | |
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| ID | 8134920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4432153 |
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| End bp | 4434600 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867240 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_003019484 |
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| Protein GI | 253690294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.930878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCTC CGTTTATCTA TACTTCGCCA ACGCTCAGTG TGGAAGCGCT GAAACACTCT
ATTGCTTACA AGCTCATGTT TACCGTGGGG AAAGATCCCT CGATTGCGAA TAAACATGAC
TGGCTGAACG CCACGCTGCT GGCCGTGCGT GACCGGATGG TGGAACGCTG GCTGCGCTCG
AACCGCGCAC AGCTTTCGCA GGATGTGCGG CAGGTGTATT ACCTGTCGAT GGAATTTTTG
CTGGGGCGGA CGCTGTCGAA CGCGCTGCTG GCGATGGGAT TGTATGACGA TCTGAAAGCG
GCGCTGGATG GCATGGGGCT GGAGCTGGAC GATCTGCTAG AGGAAGAAAA TGACCCAGGC
TTAGGAAACG GCGGTCTGGG ACGTTTGGCA GCCTGTTTTC TGGATTCGCT GGCGACGATG
GCCCTGCCTG GGCGCGGCTA CGGCATTCGC TACGAATACG GCATGTTCAA GCAGAACATT
GTTAACGGCA AGCAGGCGGA ATCGCCGGAC TACTGGCTGG AATACGGCAA CGCGTGGGAA
TTCCCGCGCC ACAGCACGCG CTATAAAGTG CGCTTCGGTG GCCGAATCCA GCAGGAAGGC
AGCAAAATGC GCTGGCTGGA AACGGAAGAA GTTATCGCGT GCGCTTACGA CCAAATCATT
CCCGGTTTTG ATACGGACGC CACCAATACC CTGCGTTTGT GGGGCGCGCA GGCCAGTAAT
GAAATCAATC TGGGTAAATT CAATCAGGGC GACTATTTTG CGGCGGTAGA AGATAAAAAC
CACTCGGAAA ACGTGTCGCG CGTGCTGTAT CCCGATGATT CCACCTATTC AGGCCGCGAG
CTGCGCCTGC GTCAGGAATA CTTCCTGGTT TCCGCCACGG TGCAGGACAT TCTGAACCGC
CACTGGATGA TGCATAAGAC TTACGCCAAT CTGGCAGAGA AGTTCGCTAT TCACCTGAAC
GATACTCACC CGGTGCTGGC TATCCCTGAG TTGATGCGCC TGCTGATCGA TGAGCACAAA
TTTAAATGGA TAGAGGCGTG GACGGTGGTG AGGAAAGTCT TCTCCTATAC CAACCATACG
CTGATGCAGG AAGCGCTGGA AACCTGGCCA GTTGATATGC TGGGTAAAAT CCTGCCGCGC
CACCTGCAAT TGATTTTCGA AATTAACGAA CATTTTCTGG AATACGTCCA GAAAGAAGCC
CCGGATGACA ACGATCTGCT GGCGCGGGTT TCCATCATTG ATGAAAACAA CGGACGTAAA
GTCCGCATGG CGTGGTTGGC CGTGGTCGCC AGCCATAAGG TCAACGGCGT ATCGGAGCTG
CACTCGGATC TGATGGTACA GTCTCTGTTT GCCGATTTTG CTCGCCTCTT CCCTAATCGC
TTCTGCAATA AAACCAATGG GGTGACGCCA CGGCGCTGGC TGGCGCTGGC TAACCCATCG
CTCTCTAAAC TGTTGGACGA CACGATAGGG CAGACCTGGC GCACCGACCT GAGCCAGTTG
AGCGAACTGA AACAGCACAT CGATTATCCG GCGTTTGTGC AGAAAATCCG TAAGGTGAAG
CTGAAGAACA AAGTGCGCTT AGCGACCTAT ATGGCGGAAA ACCTGAATAT TGTGGTTAAC
CCCGAGTCGC TGTTCGATGT GCAGATTAAG CGTATTCACG AATACAAACG GCAACTGCTG
AATGTATTGC ACATCATCAC GCTCTATAAC CGCATTAAAG ACGATCCAGA AGTTGCGCGT
GTGCCGCGCG TCGCCATCTT TGCGGGCAAG GCGGCATCGG CCTATTACAT GGCGAAGCAC
ATTATCAACC TGATCAACGA CGTCGCGAAG GTGATCAACA ACGATCCGGC ATTGCACGAT
CGGCTGAAAG TGGTCTTCAT CCCGAACTAC AGTGTGAGTC TGGCACAGTT GATCATCCCG
GCTGCCGATC TCTCTGAGCA GATCTCGCTG GCGGGGACGG AAGCCTCCGG GACCAGTAAT
ATGAAATTTG CCCTGAACGG CGCGCTGACG ATCGGCACAC TGGATGGAGC GAATGTCGAA
ATGCTGGAAC ACATTGGCGA AGAAAATATG TTTATCTTCG GCAACACGGC GGAGCAGGTC
GAAGCGCTGC GCCAGAGTGG CTATAACCCA CGGCAATATT ACGATCAGGA TGAAGAGCTG
CGCCGCGTAC TGACGCAAAT TACCACGGGC GTCTTCAGCC CTGATGACAG CCGACGCTAC
AGCGATCTGT TTGATTCACT GGTGAATTTT GGCGATTACT ATCAGCTACT GGCAGACTAT
CGCAGCTATG TGGATACGCA GGATAGGGTG GATGAGCTGT ATGAGAACAA GGACGAATGG
GCGCGCTGTG CCGTCAAGAA TATTGCCAAT ATGGGTTATT TCTCGTCTGA CCGCACCATC
GGTGAATATG CAGAAGATAT CTGGGATATC AAACCGATAC GGTTGTGA
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| Protein sequence | MNSPFIYTSP TLSVEALKHS IAYKLMFTVG KDPSIANKHD WLNATLLAVR DRMVERWLRS
NRAQLSQDVR QVYYLSMEFL LGRTLSNALL AMGLYDDLKA ALDGMGLELD DLLEEENDPG
LGNGGLGRLA ACFLDSLATM ALPGRGYGIR YEYGMFKQNI VNGKQAESPD YWLEYGNAWE
FPRHSTRYKV RFGGRIQQEG SKMRWLETEE VIACAYDQII PGFDTDATNT LRLWGAQASN
EINLGKFNQG DYFAAVEDKN HSENVSRVLY PDDSTYSGRE LRLRQEYFLV SATVQDILNR
HWMMHKTYAN LAEKFAIHLN DTHPVLAIPE LMRLLIDEHK FKWIEAWTVV RKVFSYTNHT
LMQEALETWP VDMLGKILPR HLQLIFEINE HFLEYVQKEA PDDNDLLARV SIIDENNGRK
VRMAWLAVVA SHKVNGVSEL HSDLMVQSLF ADFARLFPNR FCNKTNGVTP RRWLALANPS
LSKLLDDTIG QTWRTDLSQL SELKQHIDYP AFVQKIRKVK LKNKVRLATY MAENLNIVVN
PESLFDVQIK RIHEYKRQLL NVLHIITLYN RIKDDPEVAR VPRVAIFAGK AASAYYMAKH
IINLINDVAK VINNDPALHD RLKVVFIPNY SVSLAQLIIP AADLSEQISL AGTEASGTSN
MKFALNGALT IGTLDGANVE MLEHIGEENM FIFGNTAEQV EALRQSGYNP RQYYDQDEEL
RRVLTQITTG VFSPDDSRRY SDLFDSLVNF GDYYQLLADY RSYVDTQDRV DELYENKDEW
ARCAVKNIAN MGYFSSDRTI GEYAEDIWDI KPIRL
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