| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3926 |
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| Symbol | |
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| ID | 8134913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4422921 |
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| End bp | 4423496 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867233 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_003019477 |
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| Protein GI | 253690287 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCGTA TTACCGATGC TGCTCAGGAG CATTTCCTGA AACTGTTGGC AAAACAGGAA
GAAGGCACAC AGATTCGCGT ATTTGTTATC AATCCAGGTA CGCCAAACGC CGAGTGCGGT
GTCTCGTATT GTCCGCCGGA TGCCGTAGAA GCGAGCGATA CCGTACTGAA GTTTGAAAAG
ATTTCCGCTT ACGTAGACGA ACTCAGCGCA CCTTATCTGG AAGACGCTGA AATCGACTTC
GTAACTGACC AGTTAGGTTC TCAGCTCACG CTGAAAGCGC CAAACGCCAA AATGCGTAAA
GTGGACGACA GCGCCCCGCT GATGGAACGC GTTGAGTATG TGCTGCAATC GCAGATCAAC
CCACAGCTGG CTGGCCACGG CGGCCGCGTG ACGCTGATGG AAATTACCGA TGACGGCATG
GCGATTCTGC AATTTGGCGG TGGCTGTAAC GGCTGTTCGA TGGTCGACTA CACGCTGAAA
GAAGGGATCG AGAAAGAGCT GCTGGAAAAA TTCCCTGAGC TGAAAGGCGT GAGAGATCTC
ACCGAGCACC AGCGCGGCGA ACACTCCTAC TATTAA
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| Protein sequence | MIRITDAAQE HFLKLLAKQE EGTQIRVFVI NPGTPNAECG VSYCPPDAVE ASDTVLKFEK
ISAYVDELSA PYLEDAEIDF VTDQLGSQLT LKAPNAKMRK VDDSAPLMER VEYVLQSQIN
PQLAGHGGRV TLMEITDDGM AILQFGGGCN GCSMVDYTLK EGIEKELLEK FPELKGVRDL
TEHQRGEHSY Y
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