Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3902 |
Symbol | |
ID | 8134889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4389403 |
End bp | 4390560 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644867209 |
Product | NAD/NADP octopine/nopaline dehydrogenase |
Protein accession | YP_003019453 |
Protein GI | 253690263 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1893] Ketopantoate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG CGCTAAGCGG GCAGCCGCTT AACGTGGTGA TTTGCGGGGC CGGTAAGACC GGCCATCTCG CCACGGTACT GTTTACACAA CTGCCGGACG TCAGGGTGAC GCTGCTGGGT AGTCATCCGC GCCTGCCGGA AGCCTATCAG CAGCACGGTA AACGTCTACA TGCCCTGTTG CCGGATGGCG AGACGCTGAC GGCCACGCCG GACTGTGTGA CCTGCGATCC GGCGGAAGCC TGCCGCGATG CGGACGTCGT TATCATCACC GTTCCCGCTA ACTTCCGCGC CGATCTTCTG GCACGGATTG CTCCTCATCT GCCCGCCAAC AAACCGGTTT ATGTTGGCGC CATTCCCGGT TTTTGCGGTT TTGACTGGCT GGCTGAACGC GAGCTGGCCG CTCGCCCGAA CGCGGTGATT TGGGGCATGA AGGACGTTGC GCACATTGCG TTTGATTTGC TGCCGGGTCA GTCGATCAAA ATGGGCGGCG AAAAGGCCAC GCTGTATGTC GCCACGCATC GGCGTGAAAC GGCTGCGAGC CAGCAGGCGC TGATGGTGCT GTTGCAACGG CTCTATTCTG CACCAGTGGT GCTGTTACCG GATTATCTGG AGATCACGCT GACGCCGGGT AACCCGATTA TGCACAGTGC GGTGATTTAT GGCCTGATCG GTCCCTATGG ACAGTGGCAC GCCCGACCGC TCTCACAGCC GCTGTGCTGG TGGAATGATT GCCCGGAACT CGGTGCCTAT TATCTGGAAC GTATGGACGA GGAGAACCAA CGGCTGTGTG CAGCGCTGGA GGTGCGGCTT GGTGTGCAGT TGGATTCGGT GCTGCCGCTC AAGCAGGAGA TTATCGATGC CTATGGTGAG CAGATTGCCG ATGCGCACAC GATGCTCTCT GTGCTGCGCA CCAATCAGGC TTACCACGGC ATCGGTCTGC CGCTGCGAAA AGATGGCGCG GGCGGGTATG TGTTTGATAC GCAGCATCGG GTGTTTCAGG AGGATATCGC CTACGGCCTG AGCCTGCTGG TGACCATCGC GGAGAATCTG GCTGTTAGCG TGCCGTACAT TGAGGAAGTC TACCGGTGGT GCAGCGATTA TATGGGCACT TCCACGCAGG ATCGTCCCGA CTATTTCCCG CTACAGTGGC TGAAATGA
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Protein sequence | MTEALSGQPL NVVICGAGKT GHLATVLFTQ LPDVRVTLLG SHPRLPEAYQ QHGKRLHALL PDGETLTATP DCVTCDPAEA CRDADVVIIT VPANFRADLL ARIAPHLPAN KPVYVGAIPG FCGFDWLAER ELAARPNAVI WGMKDVAHIA FDLLPGQSIK MGGEKATLYV ATHRRETAAS QQALMVLLQR LYSAPVVLLP DYLEITLTPG NPIMHSAVIY GLIGPYGQWH ARPLSQPLCW WNDCPELGAY YLERMDEENQ RLCAALEVRL GVQLDSVLPL KQEIIDAYGE QIADAHTMLS VLRTNQAYHG IGLPLRKDGA GGYVFDTQHR VFQEDIAYGL SLLVTIAENL AVSVPYIEEV YRWCSDYMGT STQDRPDYFP LQWLK
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