| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3872 |
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| Symbol | |
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| ID | 8134859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4358815 |
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| End bp | 4359531 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867179 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003019423 |
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| Protein GI | 253690233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.171228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGACA TTACCTTCTG GCAACTCATC AGTTTTGGTG AGCATGGCTG GGGAAAATTA
TTACTGATTG GGGCAGGAAT GACGCTCGCA CTGGCGATCT GCGGTTTCCT GCTGGGAGCT
GTGATCGGCA CGATTGGCGC CTGGTCCAAA ATTTGCGGCA ATCGCCCCGT GCGCTATCTG
GCTGATGGGT ACACCACCAT CACCCGAGGC ATACCAGACC TGCTCATCAT CTACCTGCTT
TATTTTGGCG GCAGCTCCGC ATTAACGCTG CTGGCTAAAC TGTTTGGCAG CAACGAATTT
CTCGGCTTTC CCGGCTTCCT CGCAGGTGTC TTCGCCGTCG GCATTTCCTC CGGCGCACAG
CAGACGGAAG TGTATCGTGG CGCGTTCTAC GCCGTTTCCA AAGGGGAAAT TGAAGCCGCT
AAAGCCTGCG GCATGCCAAC GATGCTACGC CTGCGCCGCA TCATCATGCC GCTTCTGCTG
CGCCACGCCA TCCCCGCGCT CGGCAACGTA TGGCAACTGG TGCTGAAAAC CTCTGCGCTG
GTTTCCGTTA CCGGTGTCGC CGAACTGATG ACACAGTCGC AAACCGGTGC GGGCTCTACT
GGCAAACCGT TTGATTTCTT CATGGCTGCC GCACTGCTGT ATCTGCTTAT TTCGATCGGT
TCCGGCTGGA TTATGCGCCG CGCCGAGTCT CATTATTCCC GGGGTGTGAA ACGCTGA
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| Protein sequence | MEDITFWQLI SFGEHGWGKL LLIGAGMTLA LAICGFLLGA VIGTIGAWSK ICGNRPVRYL
ADGYTTITRG IPDLLIIYLL YFGGSSALTL LAKLFGSNEF LGFPGFLAGV FAVGISSGAQ
QTEVYRGAFY AVSKGEIEAA KACGMPTMLR LRRIIMPLLL RHAIPALGNV WQLVLKTSAL
VSVTGVAELM TQSQTGAGST GKPFDFFMAA ALLYLLISIG SGWIMRRAES HYSRGVKR
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