| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3860 |
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| Symbol | |
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| ID | 8134847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4342995 |
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| End bp | 4344119 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867167 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_003019411 |
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| Protein GI | 253690221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC TACTGCCTTC TGCAGCCGCT GGGCTGTTAT TACTTGCGGC TCAACCGACA
ATGGCGGCAA ATACGGGGGG TTATGCCACC ACTGACGGCG GCGACGTTGC CGGTGCTGTG
AAAAAAACCG CACGTTCCAT GCAAGATATT ATTGATATCA TCGAAGAAGC GAAACTGGAT
TCCAAAGGTA AGAAAGTCAA AGGAGGCGCT TACCCGCTCG TCATCACCTA TAACGGTAAT
GAAGATGCGC TGATTAAAGC CGCAGAGAAC GATATCTGCG GTCAGTGGAA GAAAGACGCA
CGCGGTGTGG AAATCAAAGA GTTCACCAAA GGGATTACCA TCATCGGAAC TAACGGTTCT
TCCGCTAACT TTGGGATCTG GCTGGTTAAA TCATCCGATA TCGTTATCCG CAATATGCGT
TTCGGCTACA TGCCTGGCGG CGCGCAGGAC GGCGATGCGA TTCGTATCGA TAACACGCCG
AACGTCTGGA TTGACCACAA CGAGATCTTC GCGAAAAACT TTGAATGCGC AGGCACAAAA
GACGGTGACA CCACATTCGA ATCCGCGATT GATATCAAGA AAGCCTCAAC CAACGTGACG
GTGTCGTACA ACTACATTCA CGGCATCAAA AAAGTCGGTC TGAGCGGCTT CAGCAGCAGC
GATACGGGCC GTGACCTGAC TTACCATCAC AATATTTACG ATGACGTTAA CGCCCGCCTC
CCACTGCAAC GTGGTGGTAA AGTTCACGCC TACAATAACC TGTATACCAA CGTCACCAGT
TCTGGCCTGA ACGTGCGCCA GAATGGGATT GCGCTGATCG AACGTAACTG GTTCGAAAAT
GCGAAAAACC CAGTGACCTC ACGTTACGAC GGTTCCAACT TCGGTACGTG GGATCTGCGT
AATAACAACG TTATGAGCCC GGCTGACTTC GCTAAATACA ACATCACCTG GGATAAAGAT
TCCAAGCCCT ACGTGAATGC TGAAGACTGG AAGAGCACAG GCACGTTCCC TTCTCTTCCT
TACAGCTACT CTACCGTTTC ACCACAGTGC GTGAAGGATA AACTGGCGAA CTATGCTGGC
GTGGGCAAAA ACCTTGCCGT CCTGACAGCA GCAAGCTGTA ACTAA
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| Protein sequence | MKYLLPSAAA GLLLLAAQPT MAANTGGYAT TDGGDVAGAV KKTARSMQDI IDIIEEAKLD
SKGKKVKGGA YPLVITYNGN EDALIKAAEN DICGQWKKDA RGVEIKEFTK GITIIGTNGS
SANFGIWLVK SSDIVIRNMR FGYMPGGAQD GDAIRIDNTP NVWIDHNEIF AKNFECAGTK
DGDTTFESAI DIKKASTNVT VSYNYIHGIK KVGLSGFSSS DTGRDLTYHH NIYDDVNARL
PLQRGGKVHA YNNLYTNVTS SGLNVRQNGI ALIERNWFEN AKNPVTSRYD GSNFGTWDLR
NNNVMSPADF AKYNITWDKD SKPYVNAEDW KSTGTFPSLP YSYSTVSPQC VKDKLANYAG
VGKNLAVLTA ASCN
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