Gene PC1_3740 details

Gene Information

• Locus tag: PC1_3740
• ID: 8134721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4224785
• End bp: 4226842
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644867041
• Product: hypothetical protein
• Protein accession: YP_003019291
• Protein GI: 253690101
• COG category: [S] Function unknown
• COG ID: [COG4907] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGT GGAAGGAGGC GCTGCGTCGT TGCGGCTGTC TGGTTTTACT CTGCTGGAGC 
GCTCTGGTTC AGGCAAACGC GCTGGATAAT ACGTTTATCC CCGGTGTTAG CGCTGCGCCG 
GGAACAGCGG CTTCTCTTCG GGTGGCGGAC GAACGTATTT TGCTGTTTGA TTCGCAGGCT 
CATTTCCAGA CAGATGGCAC CATGCTGGTG GATGAGACCA TTCAGGTGCA ATCGACCGGA 
GAGCAAATCA AGCGAGGAAT TTTCCGCACG CTACCGGTGG TCTGGCATCG GCAGGACGGC 
AGTACGTTCC GGCTGGCGTA CCAGATTAAA CAGGTGCTGC GGGAGGGAGA ACCTGAACGC 
TACAGCATTG ATGACACGGG CGAGCAGATT AAGATACTGA TTGGCAGCGC CGATCGCCAA 
CTGCAACCCG GTGTTCACCG CTACCGTATT CAGTATCAGG TGAGTAACCA TTTCAGCCGC 
TTTCCTGACT GGGATGAACT GTATTGGAAC GTCACGGGCA ATGGCTGGAG CTACCCCATA 
AATCAGGTGC GTTTTCGCCT GAACCTGCCG GATCAAGCCG CGTTTCTCTC TACCCGCGGC 
AAAGATACCC GCCTGCAATC GATTGATGTC TATACCGGTC CGGTGGGCAG GAAAGGTGAT 
AATGCCCGTA TTCTGGCAGA TGGCAGCATC GAGACGCTCG CGCCGCTGCA TCCGGGGGAA 
GGGGTGACGG TCGCCTACAC CTGGCCGCGG AGTATTCTGG CGTCCGCCCC CGCACCGCAG 
GAAGACTCGC TGCTGGGGCA TTGGCTCTCG CCCACGCTGA AAAGTGGGAT ACTGTGGTTT 
CCTCCCTTTC TGATCGTGGT TTACTACCTG TTTTGGTGGG GTAAGCATAT AACCCCCCTT 
TGCTTAACGA AACCCGCAGT CGTGCCGTTG TATAGCGTTC CCGATGGCGT TTATCCCGGC 
TATGTACGCT ACCTCTGTCA ACGAACCTAC GATAATGTGG CTTTCTCCAG CGATATCCTG 
GATCTGGTTG CTAAGCGTGC GATTGCACTG ACAAAAGTCA TCCATAAGCC GAGAAAAAGC 
CGAAGTGGTA TGACGCAGAG GCGAGAAGAG CAGTGGCTCA CTCGCTTACC TGAAAGCGAA 
TTCATGAAGC TGATCTCTGA GGATAAACAG CTCCTTAGCA CTTTGTTTCC CGGCAAGACG 
AAGAAACTGG ATATTACAGA AACCAGTATG CGTTCGGTGC CGATGCAGAA GGCGCGCAAG 
GCGCAGAAGG CGCATTATGA AAAAATGCAC CCGACGTTGT TTTTATCGAT TTCCGGCGCG 
GTGAGGTCGG GCATTGCCCT GACCCTGCTG GTTCCTGTGC TGTACGGCCT GTTCTTTGAC 
CTTAGAGCGG CGATGAGCAC GATTTTCTGC CTGCCTTTTC TGCTGTTCAG TACGCTGCTG 
TGTTTCAAGT TACTGAAATA TGCACGCTAT TCCGCGTTGC TACGCAATAG CGAGAAAAGC 
AAAGTCTCGC TCTTTCTGGT GTTGGCGGGT TTCCTCTTCA CATTGCCTTT TGGCCTTTCG 
CTGTTGCGCT TACTGACATC ATCCCAGCTG CCGACAGACT ATCGGGGGGC CTTATCGGTA 
AGCCTGTTAC TGTGTCTGGG TTTCTTCTGC ATCGTCCCGC GTCATACCCA GAAAGCATTG 
AATGGTCTGG CCGTAGCCAA AGGGATGATG CTGTATCTGC GCGCCGCAGA AGAGCGTCGT 
TATGAAACGT TGTATCCGCC CGATGAGCGA GTGACGCATT TTGAACGCAT GCTGCCTTAT 
GCGCTGGCGT TGGGCGTGGG GGAAACCTGG GCCAATACGT TTGCCCAGTA TCTGAAGCGT 
CACCAAATGG TTTCCGACGT GTTCTCCAGT ACGCAGTGGG ACGGTATTTC CCAGTTCAAC 
AGCGCGTGTA GCGCCTCGTC AAGGACGGTG GTGAACTCCG GTTCTGGCGG AGGAGGCGGC 
AGTTCCAGTG GTTCGGGTTC TTCCGGCGGA GGTTCGTCGG GGGGCGGTTC CGGCGGCGGT 
GGAGGCGGTG GGTGGTAA 

 

Protein sequence

MAKWKEALRR CGCLVLLCWS ALVQANALDN TFIPGVSAAP GTAASLRVAD ERILLFDSQA 
HFQTDGTMLV DETIQVQSTG EQIKRGIFRT LPVVWHRQDG STFRLAYQIK QVLREGEPER 
YSIDDTGEQI KILIGSADRQ LQPGVHRYRI QYQVSNHFSR FPDWDELYWN VTGNGWSYPI 
NQVRFRLNLP DQAAFLSTRG KDTRLQSIDV YTGPVGRKGD NARILADGSI ETLAPLHPGE 
GVTVAYTWPR SILASAPAPQ EDSLLGHWLS PTLKSGILWF PPFLIVVYYL FWWGKHITPL 
CLTKPAVVPL YSVPDGVYPG YVRYLCQRTY DNVAFSSDIL DLVAKRAIAL TKVIHKPRKS 
RSGMTQRREE QWLTRLPESE FMKLISEDKQ LLSTLFPGKT KKLDITETSM RSVPMQKARK 
AQKAHYEKMH PTLFLSISGA VRSGIALTLL VPVLYGLFFD LRAAMSTIFC LPFLLFSTLL 
CFKLLKYARY SALLRNSEKS KVSLFLVLAG FLFTLPFGLS LLRLLTSSQL PTDYRGALSV 
SLLLCLGFFC IVPRHTQKAL NGLAVAKGMM LYLRAAEERR YETLYPPDER VTHFERMLPY 
ALALGVGETW ANTFAQYLKR HQMVSDVFSS TQWDGISQFN SACSASSRTV VNSGSGGGGG 
SSSGSGSSGG GSSGGGSGGG GGGGW