| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3734 |
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| Symbol | |
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| ID | 8134714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4216733 |
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| End bp | 4217971 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867034 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019285 |
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| Protein GI | 253690095 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.637974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATC CTCGCTCACG GATGGAAGCG GGGCAAGGCC ACTATGGTCC TTCGCTACAA
CAGCGTCTGC TTGAGCCGTT GAACAGCCTT ATTCTTCTGG GACGGCGTGC CGTTCTGGCT
CTCCTTGGAA TTGCGGTGGG ATGTGGATCT GTTGTCGCTT TGCTTAATAT CGGGCACAAC
GCGGAAGCCG AAGCCATGGG CGTATTCAGA GGAATGGGCA GCGACCTGCT GGTTGCCACC
GTGCAGAATC GGGTAGGCAG CCATGCTACC GGCTCGGCTC CGGCAGACTT GGATATCCCC
GTTTTGCGCC AAAATTTGCC TGATATTAAG GCGGCAACCG CGCTAATTAT TACCTCCACC
GAAGCACGGC TGCGTGGCCG TTCACTGAGC ACCATGGTGG TGGGTAGCCG GGCTGAACTG
TCGGACGTGC TAGGGCTGAC GCTCGCGCAG GGTCGCTACC TGAGTGATTT CGATGAGCAA
AGTACCTATA TCGTGTTGGG GGCGAATGTT GCGGAACAAT GGGCATCGCA GGGGGGCATC
GCGGCCTTGG GTGAACGCGT GCAGGTGGGA GGATACCTGT TTGAGATCGT CGGAATCCTT
CAGCCGCAGG GGCACAACCC TCTGGTGCCT GTCTCGGTTG ATGATTCTAT CCTGATGCCG
ATCTCTGGCA TGCGTCGCGT CATGCCTGCC CCACAAATCG TCAGCGTAAT TGCACGTAAC
CACAACAGCG ATACGCTGGT GCAAACGGGC TCACAGTTAA AGGATTACTT GGTTCCTCTG
ATGCCGAAAC TGGATATCGA TGTGCAAATT CCACAGCAGC TACTGGAGGG AATGGCACAG
CAGTCGAGGA TGTTTTCGTG GCTGCTGGCG GGGTTGGGAG GGATTTCCCT GCTGGTTGGT
GGGGTCGGGG TGATGAATGT CATGGTGATG AATGTGTCCG AGCGACGTCG TGAAATCGGT
GTTCGTATGG CGCTAGGTGC GCGGCCGCGT GATATTGCGG GGCTATTTTT ACTGGAGGCC
GTGGTGCTAT CCGCTTGCGG AGCCTTGATC GGGGCGGTGT GTGGCATCGC GGCGGCGTGG
CTGTTTGTCT TTTTTTCAGG CTGGTCAGCC TTTTCACTTT CGGCATTGCC ACTTCCCCTC
GGTATTGGTA GTTCATTGGC GATTGGCCTG TTTTTTGGGC TTAACCCGGC GATGACCGCA
GCACGCCTTG AACCCGTACA GGCGCTACGC GATGCGTAA
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| Protein sequence | MSDPRSRMEA GQGHYGPSLQ QRLLEPLNSL ILLGRRAVLA LLGIAVGCGS VVALLNIGHN
AEAEAMGVFR GMGSDLLVAT VQNRVGSHAT GSAPADLDIP VLRQNLPDIK AATALIITST
EARLRGRSLS TMVVGSRAEL SDVLGLTLAQ GRYLSDFDEQ STYIVLGANV AEQWASQGGI
AALGERVQVG GYLFEIVGIL QPQGHNPLVP VSVDDSILMP ISGMRRVMPA PQIVSVIARN
HNSDTLVQTG SQLKDYLVPL MPKLDIDVQI PQQLLEGMAQ QSRMFSWLLA GLGGISLLVG
GVGVMNVMVM NVSERRREIG VRMALGARPR DIAGLFLLEA VVLSACGALI GAVCGIAAAW
LFVFFSGWSA FSLSALPLPL GIGSSLAIGL FFGLNPAMTA ARLEPVQALR DA
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